RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TMPRSS15P98073 1019 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 LAIR1Q6GTX8 287 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 TMC3Q7Z5M5 1100 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 PELI3Q8N2H9 469 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 MMGT1Q8N4V1 131 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 TP53I13Q8NBR0 393 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-224ENST00000483359 PLA2G15Q8NCC3 412 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 BRSK1Q8TDC3 778 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 SERPINB12Q96P63 405 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 SRPK1Q96SB4 655 aaKnown RBP17.8■□□□□ 0.44
CPNE1-224ENST00000483359 C1QTNF7Q9BXJ2 289 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 DMTF1Q9Y222 760 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 WDR87Q6ZQQ6 2873 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 ESYT3A0FGR9 886 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 PATE3B3GLJ2 98 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 K7ESM1 405 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 BCAT2O15382 392 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-224ENST00000483359 EPN2O95208 641 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 LMNAP02545 664 aaKnown RBP17.8■□□□□ 0.44
CPNE1-224ENST00000483359 MGAT1P26572 445 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 HMGCLP35914 325 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 MPLP40238 635 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 SPINT3P49223 89 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 SARNPP82979 210 aaKnown RBP17.8■□□□□ 0.44
CPNE1-224ENST00000483359 CDK16Q00536 496 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 STAT4Q14765 748 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 TAF1AQ15573 450 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-224ENST00000483359 LRRC8BQ6P9F7 803 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 GCNT7Q6ZNI0 430 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 TECPR1Q7Z6L1 1165 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 PCGF5Q86SE9 256 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 SYT12Q8IV01 421 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 CBARPQ8N350 705 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-224ENST00000483359 TMEM145Q8NBT3 493 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 OR13C4Q8NGS5 318 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 CENPTQ96BT3 561 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 AP2M1Q96CW1 435 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 RAB17Q9H0T7 212 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 POM121BA6NF01 834 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 C2orf81A6NN90 581 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 CCL22O00626 93 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 CRTAMO95727 393 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 TRADDQ15628 312 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 PTAR1Q7Z6K3 402 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-224ENST00000483359 CAND1Q86VP6 1230 aaKnown RBP17.79■□□□□ 0.44
CPNE1-224ENST00000483359 GPR26Q8NDV2 337 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 OR4K2Q8NGD2 314 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 C1orf216Q8TAB5 229 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 PWWP2AQ96N64 755 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 FSCN3Q9NQT6 498 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 SYBUQ9NX95 663 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 GMEB2Q9UKD1 530 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 PKP3Q9Y446 797 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 FPGTO14772 594 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 STX7O15400 261 aaKnown RBP17.79■□□□□ 0.44
CPNE1-224ENST00000483359 LDB2O43679 373 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 CFIP05156 583 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 GNSP15586 552 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 BPIP17213 487 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 CSNK1EP49674 416 aaKnown RBP17.79■□□□□ 0.44
CPNE1-224ENST00000483359 RACK1P63244 317 aaKnown RBP17.79■□□□□ 0.44
CPNE1-224ENST00000483359 RAET1GQ6H3X3 334 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 MICALCLQ6ZW33 695 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 MPP5Q8N3R9 675 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 AGAP2Q99490 1192 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 RIOK2Q9BVS4 552 aaKnown RBP17.79■□□□□ 0.44
CPNE1-224ENST00000483359 ABCG8Q9H221 673 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 BFARQ9NZS9 450 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 IL17CQ9P0M4 197 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 ANAPC5Q9UJX4 755 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 OR1A2Q9Y585 309 aa17.79■□□□□ 0.44
CPNE1-224ENST00000483359 WNT1P04628 370 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 LPOP22079 712 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-224ENST00000483359 NUDT1P36639 197 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 GUCY2DQ02846 1103 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 CALCOCO2Q13137 446 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 INPP5AQ14642 412 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 MORF4L2Q15014 288 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 AGERQ15109 404 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 DUPD1Q68J44 220 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 TCEAL6Q6IPX3 200 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 HIBCHQ6NVY1 386 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-224ENST00000483359 HOOK3Q86VS8 718 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 MCUQ8NE86 351 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 DENND6BQ8NEG7 585 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 ASB12Q8WXK4 309 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 TCEAL3Q969E4 200 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 LOXL4Q96JB6 756 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 DNAJC1Q96KC8 554 aaKnown RBP17.78■□□□□ 0.44
CPNE1-224ENST00000483359 LENG8Q96PV6 779 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-224ENST00000483359 NCDNQ9UBB6 729 aa17.78■□□□□ 0.44
CPNE1-224ENST00000483359 TP73O15350 636 aa17.77■□□□□ 0.44
CPNE1-224ENST00000483359 GPR39O43194 453 aa17.77■□□□□ 0.44
CPNE1-224ENST00000483359 BANF1O75531 89 aa17.77■□□□□ 0.44
CPNE1-224ENST00000483359 CD38P28907 300 aa17.77■□□□□ 0.44
CPNE1-224ENST00000483359 AFF3P51826 1226 aaKnown RBP17.77■□□□□ 0.44
CPNE1-224ENST00000483359 ZNF140P52738 457 aaPredicted RBP17.77■□□□□ 0.44
CPNE1-224ENST00000483359 CASC4Q6P4E1 433 aa17.77■□□□□ 0.44
CPNE1-224ENST00000483359 FAM151BQ6UXP7 276 aa17.77■□□□□ 0.44
CPNE1-224ENST00000483359 PPHLN1Q8NEY8 458 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms