RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 HIDE1A8MVS5 230 aa27.53■■■□□ 2
CHKB-208ENST00000479003 MAP3K13O43283 966 aa27.53■■■□□ 2
CHKB-208ENST00000479003 RNASEH1O60930 286 aaKnown RBP27.53■■■□□ 2
CHKB-208ENST00000479003 ENO3P13929 434 aaPredicted RBP27.53■■■□□ 2
CHKB-208ENST00000479003 XRCC1P18887 633 aaPredicted RBP27.53■■■□□ 2
CHKB-208ENST00000479003 GALNT1Q10472 559 aaPredicted RBP27.53■■■□□ 2
CHKB-208ENST00000479003 ART3Q13508 389 aa27.53■■■□□ 2
CHKB-208ENST00000479003 CEACAM7Q14002 265 aa27.53■■■□□ 2
CHKB-208ENST00000479003 VEPH1Q14D04 833 aa27.53■■■□□ 2
CHKB-208ENST00000479003 PTAR1Q7Z6K3 402 aaPredicted RBP27.53■■■□□ 2
CHKB-208ENST00000479003 SDCCAG8Q86SQ7 713 aaPredicted RBP27.53■■■□□ 2
CHKB-208ENST00000479003 PQLC1Q8N2U9 271 aa27.53■■■□□ 2
CHKB-208ENST00000479003 AFAP1L2Q8N4X5 818 aa27.53■■■□□ 2
CHKB-208ENST00000479003 ARRDC2Q8TBH0 407 aa27.53■■■□□ 2
CHKB-208ENST00000479003 IGSF8Q969P0 613 aa27.53■■■□□ 2
CHKB-208ENST00000479003 TRMT2BQ96GJ1 504 aaKnown RBP27.53■■■□□ 2
CHKB-208ENST00000479003 BTN2A3PQ96KV6 586 aa27.53■■■□□ 2
CHKB-208ENST00000479003 TUBGCP5Q96RT8 1024 aa27.53■■■□□ 2
CHKB-208ENST00000479003 SUDS3Q9H7L9 328 aaPredicted RBP27.53■■■□□ 2
CHKB-208ENST00000479003 CYP4F12Q9HCS2 524 aa27.53■■■□□ 2
CHKB-208ENST00000479003 VWA7Q9Y334 891 aa27.53■■■□□ 2
CHKB-208ENST00000479003 FLOT2Q14254 428 aa27.53■■■□□ 2
CHKB-208ENST00000479003 SIRPB2Q5JXA9 342 aa27.53■■■□□ 2
CHKB-208ENST00000479003 PLPP4Q5VZY2 271 aa27.53■■■□□ 2
CHKB-208ENST00000479003 DNAJB7Q7Z6W7 309 aaPredicted RBP27.53■■■□□ 2
CHKB-208ENST00000479003 TRAPPC9Q96Q05 1148 aa27.53■■■□□ 2
CHKB-208ENST00000479003 MEAF6Q9HAF1 191 aa27.53■■■□□ 2
CHKB-208ENST00000479003 MRGBPQ9NV56 204 aa27.53■■■□□ 2
CHKB-208ENST00000479003 LOC285095A0A1B0GVY8 99 aa27.52■■■□□ 2
CHKB-208ENST00000479003 IGLV3-27P01718 113 aa27.52■■■□□ 2
CHKB-208ENST00000479003 DPP6P42658 865 aa27.52■■■□□ 2
CHKB-208ENST00000479003 CCNHP51946 323 aaPredicted RBP27.52■■■□□ 2
CHKB-208ENST00000479003 NAIF1Q69YI7 327 aaPredicted RBP27.52■■■□□ 2
CHKB-208ENST00000479003 FBXL22Q6P050 247 aa27.52■■■□□ 2
CHKB-208ENST00000479003 SLC22A9Q8IVM8 553 aa27.52■■■□□ 2
CHKB-208ENST00000479003 PGBD5Q8N414 524 aa27.52■■■□□ 2
CHKB-208ENST00000479003 ANKRD49Q8WVL7 239 aa27.52■■■□□ 2
CHKB-208ENST00000479003 POF1BQ8WVV4 589 aa27.52■■■□□ 2
CHKB-208ENST00000479003 DDX50Q9BQ39 737 aaKnown RBP27.52■■■□□ 2
CHKB-208ENST00000479003 DRGXA6NNA5 263 aa27.52■■■□□ 2
CHKB-208ENST00000479003 CFLARO15519 480 aa27.52■■■□□ 2
CHKB-208ENST00000479003 S1PR4O95977 384 aa27.52■■■□□ 2
CHKB-208ENST00000479003 ATXN1LP0C7T5 689 aaKnown RBP27.52■■■□□ 2
CHKB-208ENST00000479003 ZCCHC18P0CG32 403 aa27.52■■■□□ 2
CHKB-208ENST00000479003 SLC26A3P40879 764 aa27.52■■■□□ 2
CHKB-208ENST00000479003 ARSDP51689 593 aa27.52■■■□□ 2
CHKB-208ENST00000479003 IL10RBQ08334 325 aa27.52■■■□□ 2
CHKB-208ENST00000479003 MED21Q13503 144 aa27.52■■■□□ 2
CHKB-208ENST00000479003 CUZD1Q86UP6 607 aa27.52■■■□□ 2
CHKB-208ENST00000479003 SPNS2Q8IVW8 549 aa27.52■■■□□ 2
CHKB-208ENST00000479003 HDAC10Q969S8 669 aa27.52■■■□□ 2
CHKB-208ENST00000479003 UXTQ9UBK9 157 aaPredicted RBP27.52■■■□□ 2
CHKB-208ENST00000479003 LZTS1Q9Y250 596 aa27.52■■■□□ 2
CHKB-208ENST00000479003 PIM1P11309 404 aaPredicted RBP27.51■■□□□ 1.99
CHKB-208ENST00000479003 ME2P23368 584 aa27.51■■□□□ 1.99
CHKB-208ENST00000479003 EPHB3P54753 998 aa27.51■■□□□ 1.99
CHKB-208ENST00000479003 RAP1GAP2Q684P5 730 aa27.51■■□□□ 1.99
CHKB-208ENST00000479003 ZFP1Q6P2D0 407 aa27.51■■□□□ 1.99
CHKB-208ENST00000479003 LILRA6Q6PI73 481 aa27.51■■□□□ 1.99
CHKB-208ENST00000479003 SPPL3Q8TCT6 385 aa27.51■■□□□ 1.99
CHKB-208ENST00000479003 ZNF483Q8TF39 744 aaPredicted RBP27.51■■□□□ 1.99
CHKB-208ENST00000479003 BTBD9Q96Q07 612 aa27.51■■□□□ 1.99
CHKB-208ENST00000479003 UTP6Q9NYH9 597 aaKnown RBP27.51■■□□□ 1.99
CHKB-208ENST00000479003 TRPM5Q9NZQ8 1165 aa27.51■■□□□ 1.99
CHKB-208ENST00000479003 MYO7AQ13402 2215 aa27.51■■□□□ 1.99
CHKB-208ENST00000479003 COCHO43405 550 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 ATP5C1P36542 298 aaKnown RBP27.5■■□□□ 1.99
CHKB-208ENST00000479003 PKNOX1P55347 436 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 TMEM150AQ86TG1 271 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 ZNF354CQ86Y25 554 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 OR6P1Q8NGX9 317 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 USP13Q92995 863 aaPredicted RBP27.5■■□□□ 1.99
CHKB-208ENST00000479003 NPAS2Q99743 824 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 ZNF334Q9HCZ1 680 aaPredicted RBP27.5■■□□□ 1.99
CHKB-208ENST00000479003 TNFRSF12AQ9NP84 129 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 DNMT3LQ9UJW3 386 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 MAFFQ9ULX9 164 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 IRAK3Q9Y616 596 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 TTC24A2A3L6 582 aaPredicted RBP27.5■■□□□ 1.99
CHKB-208ENST00000479003 LDB2O43679 373 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 ADH1AP07327 375 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 VCLP18206 1134 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 KCNQ1P51787 676 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 INHBCP55103 352 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 PRAMEP78395 509 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 MS4A2Q01362 244 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 HECTD3Q5T447 861 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 FOXB2Q5VYV0 432 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 TMEM126BQ8IUX1 230 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 PNPLA1Q8N8W4 532 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 CDK5RAP1Q96SZ6 601 aaKnown RBP27.5■■□□□ 1.99
CHKB-208ENST00000479003 NACA2Q9H009 215 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 SLC24A3Q9HC58 644 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 FIS1Q9Y3D6 152 aa27.5■■□□□ 1.99
CHKB-208ENST00000479003 C2orf78A6NCI8 922 aa27.49■■□□□ 1.99
CHKB-208ENST00000479003 PENKP01210 267 aaPredicted RBP27.49■■□□□ 1.99
CHKB-208ENST00000479003 CDKN2DP55273 166 aa27.49■■□□□ 1.99
CHKB-208ENST00000479003 ACVR1Q04771 509 aa27.49■■□□□ 1.99
CHKB-208ENST00000479003 POLD3Q15054 466 aaPredicted RBP27.49■■□□□ 1.99
CHKB-208ENST00000479003 PARP15Q460N3 678 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms