RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 IL11RAQ14626 422 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 DCAF6Q58WW2 860 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 C6orf10Q5SRN2 563 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 HEPHL1Q6MZM0 1159 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 PQLC2Q6ZP29 291 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 RBPMS2Q6ZRY4 209 aaKnown RBP5.23□□□□□ -1.57
UPF3B-203ENST00000478840 FAM47EQ6ZV65 393 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 MTSS1LQ765P7 747 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 MRGPRGQ86SM5 289 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 PATL1Q86TB9 770 aaKnown RBP5.23□□□□□ -1.57
UPF3B-203ENST00000478840 SCYL3Q8IZE3 742 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 XXYLT1Q8NBI6 393 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 SCCPDHQ8NBX0 429 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 SLC44A5Q8NCS7 719 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 CEP76Q8TAP6 659 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 HASPINQ8TF76 798 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 MSI2Q96DH6 328 aaKnown RBP5.23□□□□□ -1.57
UPF3B-203ENST00000478840 EGLN2Q96KS0 407 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 ZNF570Q96NI8 536 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 DACH2Q96NX9 599 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 SIGLEC11Q96RL6 698 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 GAD1Q99259 594 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 CCDC106Q9BWC9 280 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 KRTAP9-3Q9BYQ3 159 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 NPFFR1Q9GZQ6 430 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 LHPPQ9H008 270 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 AAMDCQ9H7C9 122 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 DNAJB4Q9UDY4 337 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 R3HDM2Q9Y2K5 976 aaKnown RBP5.23□□□□□ -1.57
UPF3B-203ENST00000478840 RAI2Q9Y5P3 530 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 CLIC4Q9Y696 253 aa5.23□□□□□ -1.57
UPF3B-203ENST00000478840 C1orf226A1L170 272 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 URADA6NGE7 173 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 LRRC3CA6NJW4 275 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 ATP2A1O14983 1001 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 RAMP2O60895 175 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 RGS11O94810 467 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 C22orf31O95567 290 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 HSP90AB1P08238 724 aaKnown RBP5.22□□□□□ -1.57
UPF3B-203ENST00000478840 DDX5P17844 614 aaKnown RBP5.22□□□□□ -1.57
UPF3B-203ENST00000478840 CD58P19256 250 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 MCCP23508 829 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 GPTP24298 496 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 AVPR1AP37288 418 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 CCR3P51677 355 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 PROK1P58294 105 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 ECT2LQ008S8 904 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 GHRHRQ02643 423 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 TMEM119Q4V9L6 283 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 CST9LP1Q5W188 147 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 ANKRD54Q6NXT1 300 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 DCLRE1AQ6PJP8 1040 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 ZNF66Q6ZN08 573 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 TAOK1Q7L7X3 1001 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 ARHGEF25Q86VW2 580 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 GPSM1Q86YR5 675 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 CAMK1DQ8IU85 385 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 OR8H3Q8N146 312 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 TTC30BQ8N4P2 665 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 MCUQ8NE86 351 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 AGBL3Q8NEM8 1001 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 PCGF1Q9BSM1 259 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 MMP27Q9H306 513 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 TASP1Q9H6P5 420 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 ESRP2Q9H6T0 727 aaKnown RBP5.22□□□□□ -1.57
UPF3B-203ENST00000478840 MAP6D1Q9H9H5 199 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 SLC28A3Q9HAS3 691 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 HINT3Q9NQE9 182 aaKnown RBP5.22□□□□□ -1.57
UPF3B-203ENST00000478840 TUBE1Q9UJT0 475 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 GTF3C4Q9UKN8 822 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 ZNF148Q9UQR1 794 aa5.22□□□□□ -1.57
UPF3B-203ENST00000478840 COL11A2P13942 1736 aaPredicted RBP5.21□□□□□ -1.58
UPF3B-203ENST00000478840 H0Y626 953 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 STMND1H3BQB6 276 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 WNT9BO14905 357 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 CLGNO14967 610 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 SMAD9O15198 467 aaKnown RBP5.21□□□□□ -1.58
UPF3B-203ENST00000478840 PLRG1O43660 514 aaKnown RBP5.21□□□□□ -1.58
UPF3B-203ENST00000478840 ATG13O75143 517 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 BCAR3O75815 825 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 KLKB1P03952 638 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 PRKCGP05129 697 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 PRLRP16471 622 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 MAOAP21397 527 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 ATP5F1P24539 256 aaPredicted RBP5.21□□□□□ -1.58
UPF3B-203ENST00000478840 METAP2P50579 478 aaKnown RBP eCLIP5.21□□□□□ -1.58
UPF3B-203ENST00000478840 CDH12P55289 794 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 ADORA2A-AS1P86434 159 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 PPARDQ03181 441 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 ST3GAL1Q11201 340 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 SLC10A2Q12908 348 aaPredicted RBP5.21□□□□□ -1.58
UPF3B-203ENST00000478840 DUSP6Q16828 381 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 IGSF11Q5DX21 431 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 KRBOX4Q5JUW0 171 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 EPHA10Q5JZY3 1008 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 SLC10A5Q5PT55 438 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 TMEM198Q66K66 360 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 MIS18BP1Q6P0N0 1132 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 ZNF782Q6ZMW2 699 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms