RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 CDKN2BP42772 138 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 KIAA1024LP59773 190 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 SRP54P61011 504 aaKnown RBP16.2■□□□□ 0.18
COL1A1-205ENST00000476387 IFI35P80217 286 aaPredicted RBP16.2■□□□□ 0.18
COL1A1-205ENST00000476387 CNGA3Q16281 694 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 PERM1Q5SV97 790 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 KAZNQ674X7 775 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 DENND2CQ68D51 928 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 ENPP7Q6UWV6 458 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 NPNTQ6UXI9 565 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 SPOCD1Q6ZMY3 1216 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 BZW1Q7L1Q6 419 aaKnown RBP16.2■□□□□ 0.18
COL1A1-205ENST00000476387 HID1Q8IV36 788 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 ZNF248Q8NDW4 579 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 ACRBPQ8NEB7 543 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 NUS1Q96E22 293 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 RBM41Q96IZ5 413 aaKnown RBP16.2■□□□□ 0.18
COL1A1-205ENST00000476387 WDR92Q96MX6 357 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 OLFM3Q96PB7 478 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 UBL7Q96S82 380 aaPredicted RBP16.2■□□□□ 0.18
COL1A1-205ENST00000476387 BRD8Q9H0E9 1235 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 KCTD5Q9NXV2 234 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 SEPT10Q9P0V9 454 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 KLQ9UEF7 1012 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 OR1A2Q9Y585 309 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 DGKBQ9Y6T7 804 aa16.2■□□□□ 0.18
COL1A1-205ENST00000476387 NPIPB15A6NHN6 443 aaPredicted RBP16.19■□□□□ 0.18
COL1A1-205ENST00000476387 CACNB4O00305 520 aaPredicted RBP16.19■□□□□ 0.18
COL1A1-205ENST00000476387 CST8O60676 142 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 HEXIM1O94992 359 aaKnown RBP16.19■□□□□ 0.18
COL1A1-205ENST00000476387 ZRANB2O95218 330 aaKnown RBP eCLIP16.19■□□□□ 0.18
COL1A1-205ENST00000476387 HOXC4P09017 264 aaPredicted RBP16.19■□□□□ 0.18
COL1A1-205ENST00000476387 CTSEP14091 401 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 CTPS1P17812 591 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 NR2C2P49116 596 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 VAV2P52735 878 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 TLE3Q04726 772 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 CCDC173Q0VFZ6 552 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 TFDP3Q5H9I0 405 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 GKN2Q86XP6 184 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 RCOR2Q8IZ40 523 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 TSACCQ96A04 125 aaPredicted RBP16.19■□□□□ 0.18
COL1A1-205ENST00000476387 SCRN2Q96FV2 425 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 BBC3Q96PG8 261 aaPredicted RBP16.19■□□□□ 0.18
COL1A1-205ENST00000476387 MCCC1Q96RQ3 725 aaPredicted RBP16.19■□□□□ 0.18
COL1A1-205ENST00000476387 TDRD1Q9BXT4 1180 aaKnown RBP16.19■□□□□ 0.18
COL1A1-205ENST00000476387 ASCL3Q9NQ33 180 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 THSD1Q9NS62 852 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 DNPEPQ9ULA0 475 aa16.19■□□□□ 0.18
COL1A1-205ENST00000476387 COL27A1Q8IZC6 1860 aaPredicted RBP16.18■□□□□ 0.18
COL1A1-205ENST00000476387 RCCD1A6NED2 376 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 BTNL10A8MVZ5 291 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 PSMD11O00231 422 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 TNFRSF10CO14798 259 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 CELA2BP08218 269 aaPredicted RBP16.18■□□□□ 0.18
COL1A1-205ENST00000476387 PDHA1P08559 390 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 LHCGRP22888 699 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 KELP23276 732 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 TRIM23P36406 574 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 MARCKSL1P49006 195 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 ZBTB17Q13105 803 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 LLGL1Q15334 1064 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 TAZQ16635 292 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 SPACA3Q8IXA5 215 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 KYQ8NBH2 561 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 PLA2G15Q8NCC3 412 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 OR6C4Q8NGE1 309 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 OR56A4Q8NGH8 313 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 EXD1Q8NHP7 514 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 ARRDC2Q8TBH0 407 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 PIH1D2Q8WWB5 315 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 PDXPQ96GD0 296 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 ATXN7L3BQ96GX2 97 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 COQ10AQ96MF6 247 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 RBM15Q96T37 977 aaKnown RBP eCLIP16.18■□□□□ 0.18
COL1A1-205ENST00000476387 CCDC3Q9BQI4 270 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 WDR26Q9H7D7 661 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 PCDH9Q9HC56 1237 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 GPR34Q9UPC5 381 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 CHKBQ9Y259 395 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 REXO2Q9Y3B8 237 aaKnown RBP16.18■□□□□ 0.18
COL1A1-205ENST00000476387 PCDHGA8Q9Y5G5 932 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 ENTPD2Q9Y5L3 495 aa16.18■□□□□ 0.18
COL1A1-205ENST00000476387 hCG_1818297A0A087WSY0 165 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 A0A0J9YYE9 177 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 GOLGA6CA6NDK9 693 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 GOLGA6BA6NDN3 693 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 NTN3O00634 580 aaPredicted RBP16.17■□□□□ 0.18
COL1A1-205ENST00000476387 FZD6O60353 706 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 TNFP01375 233 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 TRBC1P01850 177 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 GOLGA6DP0CG33 693 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 ZNF30P17039 623 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 GM2AP17900 193 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 CD86P42081 329 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 MLLT3P42568 568 aaPredicted RBP16.17■□□□□ 0.18
COL1A1-205ENST00000476387 UCNP55089 124 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 RPL26P61254 145 aaKnown RBP16.17■□□□□ 0.18
COL1A1-205ENST00000476387 NIPAL4Q0D2K0 466 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 SPIDRQ14159 915 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms