RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 KCTD5Q9NXV2 234 aa17.92■□□□□ 0.46
UPF3A-203ENST00000474056 GOLGA6AQ9NYA3 693 aa17.92■□□□□ 0.46
UPF3A-203ENST00000474056 SEPT10Q9P0V9 454 aa17.92■□□□□ 0.46
UPF3A-203ENST00000474056 PKD1L2Q7Z442 2459 aa17.92■□□□□ 0.46
UPF3A-203ENST00000474056 LAMA5O15230 3695 aa17.92■□□□□ 0.46
UPF3A-203ENST00000474056 TNFRSF10CO14798 259 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 MYCLP1P12525 358 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-203ENST00000474056 PECAM1P16284 738 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-203ENST00000474056 ZNF30P17039 623 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 CA4P22748 312 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 KELP23276 732 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 CDK3Q00526 305 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 PTSQ03393 145 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 ADCY2Q08462 1091 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 CDCP2Q5VXM1 449 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 GKN2Q86XP6 184 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 CACTIN-AS1Q8N1I8 211 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 ACRBPQ8NEB7 543 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 MAPK15Q8TD08 544 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 KRT35Q92764 455 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 GLMNQ92990 594 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 RBM15Q96T37 977 aaKnown RBP eCLIP17.91■□□□□ 0.46
UPF3A-203ENST00000474056 TEX101Q9BY14 249 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 ABCG8Q9H221 673 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 CYP4F12Q9HCS2 524 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 LUC7LQ9NQ29 371 aaKnown RBP17.91■□□□□ 0.46
UPF3A-203ENST00000474056 PHPT1Q9NRX4 125 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-203ENST00000474056 NCKIPSDQ9NZQ3 722 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 SIRPGQ9P1W8 387 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 SAE1Q9UBE0 346 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-203ENST00000474056 DKK4Q9UBT3 224 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 MOSPD1Q9UJG1 213 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 REXO2Q9Y3B8 237 aaKnown RBP17.91■□□□□ 0.46
UPF3A-203ENST00000474056 ADAMTS20P59510 1910 aa17.91■□□□□ 0.46
UPF3A-203ENST00000474056 ZZEF1O43149 2961 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 hCG_1818297A0A087WSY0 165 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 PRSS38A1L453 326 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 CASC3O15234 703 aaKnown RBP17.9■□□□□ 0.46
UPF3A-203ENST00000474056 CST8O60676 142 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 CLDN7O95471 211 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 SOD1P00441 154 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 TGM2P21980 687 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 TFDP2Q14188 446 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 LVRNQ6Q4G3 990 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 DAAM2Q86T65 1068 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 KATNAL2Q8IYT4 538 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 ARL10Q8N8L6 244 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 KYQ8NBH2 561 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 SCAMP4Q969E2 229 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 NXPE2Q96DL1 559 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 AGAP3Q96P47 875 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 TMEM168Q9H0V1 697 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 SUDS3Q9H7L9 328 aaPredicted RBP17.9■□□□□ 0.46
UPF3A-203ENST00000474056 GULP1Q9UBP9 304 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 GPR34Q9UPC5 381 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 PCDHB1Q9Y5F3 818 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 DUSP10Q9Y6W6 482 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 ZFHX4Q86UP3 3567 aa17.9■□□□□ 0.46
UPF3A-203ENST00000474056 CFAP47Q6ZTR5 3102 aa17.89■□□□□ 0.46
UPF3A-203ENST00000474056 TEAD1P28347 426 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 GPR1P46091 355 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 RPIAP49247 311 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 STC1P52823 247 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 RPL26P61254 145 aaKnown RBP17.89■□□□□ 0.45
UPF3A-203ENST00000474056 DPTQ07507 201 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 GALNT3Q14435 633 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 PRKD1Q15139 912 aaPredicted RBP17.89■□□□□ 0.45
UPF3A-203ENST00000474056 QPCTQ16769 361 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 TFDP3Q5H9I0 405 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 NT5DC3Q86UY8 548 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 CCDC50Q8IVM0 306 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 SDR16C5Q8N3Y7 309 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 CCL4L1Q8NHW4 92 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 PTCD2Q8WV60 388 aaKnown RBP17.89■□□□□ 0.45
UPF3A-203ENST00000474056 SCG3Q8WXD2 468 aaKnown RBP17.89■□□□□ 0.45
UPF3A-203ENST00000474056 AP2M1Q96CW1 435 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 LYSMD1Q96S90 227 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 AGAP2Q99490 1192 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 FRMD8Q9BZ67 464 aaPredicted RBP17.89■□□□□ 0.45
UPF3A-203ENST00000474056 NRSN2Q9GZP1 204 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 LACRTQ9GZZ8 138 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 BRD8Q9H0E9 1235 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 ABCG4Q9H172 646 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 CARS2Q9HA77 564 aaKnown RBP17.89■□□□□ 0.45
UPF3A-203ENST00000474056 DNPEPQ9ULA0 475 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 PADI4Q9UM07 663 aa17.89■□□□□ 0.45
UPF3A-203ENST00000474056 RPL26L1Q9UNX3 145 aaKnown RBP17.89■□□□□ 0.45
UPF3A-203ENST00000474056 C1orf232A0A0U1RR37 186 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 ANKRD66B4E2M5 251 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 PDE2AO00408 941 aaPredicted RBP17.88■□□□□ 0.45
UPF3A-203ENST00000474056 ZRANB2O95218 330 aaKnown RBP eCLIP17.88■□□□□ 0.45
UPF3A-203ENST00000474056 IPO7O95373 1038 aaKnown RBP17.88■□□□□ 0.45
UPF3A-203ENST00000474056 FUCA1P04066 466 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 CEACAM5P06731 702 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 PTPN3P26045 913 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 NR2C2P49116 596 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 TEX44Q53QW1 395 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 BZW1Q7L1Q6 419 aaKnown RBP17.88■□□□□ 0.45
UPF3A-203ENST00000474056 KDELC2Q7Z4H8 507 aa17.88■□□□□ 0.45
UPF3A-203ENST00000474056 TAF8Q7Z7C8 310 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms