RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 LRRK1Q38SD2 2015 aa13.52□□□□□ -0.24
CHD3-209ENST00000473376 PMS2P1A4D2B8 440 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 EFSO43281 561 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 PRKCGP05129 697 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 FGF1P05230 155 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 RARAP10276 462 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 ZNF165P49910 485 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 RPL26P61254 145 aaKnown RBP13.52□□□□□ -0.25
CHD3-209ENST00000473376 ANO6Q4KMQ2 910 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 KCTD16Q68DU8 428 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 TIGD7Q6NT04 549 aaPredicted RBP13.52□□□□□ -0.25
CHD3-209ENST00000473376 ADAMTSL4Q6UY14 1074 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 HEATR4Q86WZ0 1026 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 NRROSQ86YC3 692 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 NRSN1Q8IZ57 195 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 PGBD5Q8N414 524 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 ZDHHC1Q8WTX9 485 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 PIH1D2Q8WWB5 315 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 SYNDIG1Q9H7V2 258 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 CARS2Q9HA77 564 aaKnown RBP13.52□□□□□ -0.25
CHD3-209ENST00000473376 MRPL40Q9NQ50 206 aaKnown RBP13.52□□□□□ -0.25
CHD3-209ENST00000473376 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.52□□□□□ -0.25
CHD3-209ENST00000473376 TAAR2Q9P1P5 351 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 RPL26L1Q9UNX3 145 aaKnown RBP13.52□□□□□ -0.25
CHD3-209ENST00000473376 PCDHB11Q9Y5F2 797 aa13.52□□□□□ -0.25
CHD3-209ENST00000473376 AHCTF1Q8WYP5 2266 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 RGSL1A5PLK6 1076 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 RHPN2P1A8MT19 583 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 B4DGG1 531 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 B4GAT1O43505 415 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 CYP1A2P05177 515 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 CA4P22748 312 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 LHCGRP22888 699 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 AMPD1P23109 780 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 IL4RP24394 825 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 FASLGP48023 281 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 GPLD1P80108 840 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 SLC25A11Q02978 314 aaKnown RBP13.51□□□□□ -0.25
CHD3-209ENST00000473376 TRAF2Q12933 501 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 ZSCAN23Q3MJ62 389 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 E4F1Q66K89 784 aaPredicted RBP13.51□□□□□ -0.25
CHD3-209ENST00000473376 HSD11B1LQ7Z5J1 315 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 ZSCAN1Q8NBB4 408 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 OR4D9Q8NGE8 314 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 MAML1Q92585 1016 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 TSGA13Q96PP4 275 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 LYSMD1Q96S90 227 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 POLR1EQ9GZS1 481 aaKnown RBP13.51□□□□□ -0.25
CHD3-209ENST00000473376 CDH19Q9H159 772 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 PCDH18Q9HCL0 1135 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 SPATS2LQ9NUQ6 558 aaKnown RBP13.51□□□□□ -0.25
CHD3-209ENST00000473376 PDP2Q9P2J9 529 aa13.51□□□□□ -0.25
CHD3-209ENST00000473376 ASH1LQ9NR48 2969 aaKnown RBP13.51□□□□□ -0.25
CHD3-209ENST00000473376 NPIPB15A6NHN6 443 aaPredicted RBP13.5□□□□□ -0.25
CHD3-209ENST00000473376 MYO1FO00160 1098 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 CASC3O15234 703 aaKnown RBP13.5□□□□□ -0.25
CHD3-209ENST00000473376 FUCA1P04066 466 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 SERPING1P05155 500 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 CCNCP24863 283 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 ETV3P41162 512 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 GARSP41250 739 aaKnown RBP13.5□□□□□ -0.25
CHD3-209ENST00000473376 LIMK2P53671 638 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 GALNT2Q10471 571 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 PAFAH1B3Q15102 231 aaKnown RBP13.5□□□□□ -0.25
CHD3-209ENST00000473376 PDK2Q15119 407 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 HADHQ16836 314 aaKnown RBP13.5□□□□□ -0.25
CHD3-209ENST00000473376 MAP9Q49MG5 647 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 HGSNATQ68CP4 663 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 Q6ZVL8 140 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 USP53Q70EK8 1073 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 JAMLQ86YT9 394 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 TP53INP2Q8IXH6 220 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 PELI3Q8N2H9 469 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 Q8N9G6 341 aaPredicted RBP13.5□□□□□ -0.25
CHD3-209ENST00000473376 CCDC112Q8NEF3 446 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 EXD1Q8NHP7 514 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 CCL4L1Q8NHW4 92 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 PDCD6IPQ8WUM4 868 aaKnown RBP13.5□□□□□ -0.25
CHD3-209ENST00000473376 TAAR9Q96RI9 348 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 ETNK2Q9NVF9 386 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 TMEM63CQ9P1W3 806 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 VPS18Q9P253 973 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 PISDQ9UG56 409 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 SUFUQ9UMX1 484 aa13.5□□□□□ -0.25
CHD3-209ENST00000473376 FLNBO75369 2602 aaKnown RBP13.5□□□□□ -0.25
CHD3-209ENST00000473376 PRAMEF33A0A0G2JMD5 474 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 A0A0J9YYE9 177 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 B4E171 279 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 STMND1H3BQB6 276 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 MATN3O15232 486 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 PRAMEF10O60809 474 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 ECEL1O95672 775 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 SOD1P00441 154 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 SERPINC1P01008 464 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 TRBC1P01850 177 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 MX2P20592 715 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 CD1CP29017 333 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 ADCY8P40145 1251 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 TSPAN7P41732 249 aa13.49□□□□□ -0.25
CHD3-209ENST00000473376 GPR1P46091 355 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms