RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 BNC1Q01954 994 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 DPTQ07507 201 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 CDH17Q12864 832 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 OVGP1Q12889 678 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 SF3A2Q15428 464 aaKnown RBP12.3□□□□□ -0.44
PRKCB-205ENST00000472066 TAF1AQ15573 450 aaPredicted RBP12.3□□□□□ -0.44
PRKCB-205ENST00000472066 TPSAB1Q15661 275 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 TCEAL6Q6IPX3 200 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 ESRP1Q6NXG1 681 aaKnown RBP12.3□□□□□ -0.44
PRKCB-205ENST00000472066 PNCKQ6P2M8 343 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 KYAT3Q6YP21 454 aaKnown RBP12.3□□□□□ -0.44
PRKCB-205ENST00000472066 PPP1R21Q6ZMI0 780 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 KDM7AQ6ZMT4 941 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 Q6ZSR6 202 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 ZNF765Q7L2R6 523 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 GLT6D1Q7Z4J2 308 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 NLRP8Q86W28 1048 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 JAMLQ86YT9 394 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 DNAAF3Q8N9W5 541 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 OR13H1Q8NG92 308 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 BRSK1Q8TDC3 778 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 CPT1BQ92523 772 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 SCAMP4Q969E2 229 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 TCEAL3Q969E4 200 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 FAM122AQ96E09 287 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 KLHDC7BQ96G42 594 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 CASS4Q9NQ75 786 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 FSCN3Q9NQT6 498 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 PIH1D1Q9NWS0 290 aaKnown RBP12.3□□□□□ -0.44
PRKCB-205ENST00000472066 PKD2L2Q9NZM6 624 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 CACNA1HO95180 2353 aa12.3□□□□□ -0.44
PRKCB-205ENST00000472066 ABCA7Q8IZY2 2146 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 C2orf81A6NN90 581 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 K7ESM1 405 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 ARHGAP33O14559 1287 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 TOR1BO14657 336 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 TTI1O43156 1089 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 BUD23O43709 281 aaKnown RBP12.29□□□□□ -0.44
PRKCB-205ENST00000472066 MAGEC1O60732 1142 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 CRTAMO95727 393 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 SLC4A1P02730 911 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 SYPP08247 313 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 BPIP17213 487 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 IVDP26440 423 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 TRIM23P36406 574 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 RABIFP47224 123 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 NXPH1P58417 271 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 YPEL5P62699 121 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 MTM1Q13496 603 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 KCNJ11Q14654 390 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 KIF19Q2TAC6 998 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 CERCAMQ5T4B2 595 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 ANKRD22Q5VYY1 191 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 MAATS1Q7Z4T9 603 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 DCP2Q8IU60 420 aaKnown RBP12.29□□□□□ -0.44
PRKCB-205ENST00000472066 PELI3Q8N2H9 469 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 GPR161Q8N6U8 529 aaKnown RBP12.29□□□□□ -0.44
PRKCB-205ENST00000472066 GPR26Q8NDV2 337 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 AP2M1Q96CW1 435 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 APOOQ9BUR5 198 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 RIOK2Q9BVS4 552 aaKnown RBP12.29□□□□□ -0.44
PRKCB-205ENST00000472066 ZDHHC5Q9C0B5 715 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 FAM83DQ9H4H8 585 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 BPIFA1Q9NP55 256 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 RAD18Q9NS91 495 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRKCB-205ENST00000472066 IL17CQ9P0M4 197 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 ASIC3Q9UHC3 531 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 OR1A2Q9Y585 309 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 KCTD3Q9Y597 815 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 SNX11Q9Y5W9 270 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 ARL5AQ9Y689 179 aa12.29□□□□□ -0.44
PRKCB-205ENST00000472066 NUMA1Q14980 2115 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 LNP1A1A4G5 178 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 FAM187AA6NFU0 413 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 AP3B1O00203 1094 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 LDB2O43679 373 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 ZNF500O60304 480 aaPredicted RBP12.28□□□□□ -0.44
PRKCB-205ENST00000472066 FOXD2O60548 495 aaPredicted RBP12.28□□□□□ -0.44
PRKCB-205ENST00000472066 TSHRP16473 764 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 ENGP17813 658 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 LPOP22079 712 aaPredicted RBP12.28□□□□□ -0.44
PRKCB-205ENST00000472066 PLA2G5P39877 138 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 CTSKP43235 329 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 NPY2RP49146 381 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 SARNPP82979 210 aaKnown RBP12.28□□□□□ -0.44
PRKCB-205ENST00000472066 PDE1BQ01064 536 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 GRIK2Q13002 908 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 PTPRCAPQ14761 206 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 POU6F1Q14863 301 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 LRRC8BQ6P9F7 803 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 PRR23CQ6ZRP0 262 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 PTAR1Q7Z6K3 402 aaPredicted RBP12.28□□□□□ -0.44
PRKCB-205ENST00000472066 SPATS2Q86XZ4 545 aaKnown RBP12.28□□□□□ -0.44
PRKCB-205ENST00000472066 PPIL6Q8IXY8 311 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 SLC22A18ASQ8N1D0 253 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 NAT8LQ8N9F0 302 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 FUBP1Q96AE4 644 aaKnown RBP12.28□□□□□ -0.44
PRKCB-205ENST00000472066 AGAP2Q99490 1192 aa12.28□□□□□ -0.44
PRKCB-205ENST00000472066 TRIM51Q9BSJ1 452 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms