RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 STRADAQ7RTN6 431 aa18.94■□□□□ 0.62
NCKIPSD-209ENST00000470006 BMPERQ8N8U9 685 aa18.94■□□□□ 0.62
NCKIPSD-209ENST00000470006 SPENQ96T58 3664 aaKnown RBP18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 J3KR12 359 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 PALMO75781 387 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 FUCA1P04066 466 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 MMEP08473 750 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 ADCY8P40145 1251 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 POLD2P49005 469 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 ERV3-1Q14264 604 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 CAPRIN2Q6IMN6 1127 aaKnown RBP18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 JOSD2Q8TAC2 188 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 RNF31Q96EP0 1072 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 SPRY4Q9C004 299 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 APMAPQ9HDC9 416 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 PLEKHM1Q9Y4G2 1056 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 RPS6KL1Q9Y6S9 549 aa18.93■□□□□ 0.62
NCKIPSD-209ENST00000470006 POLR1CO15160 346 aaPredicted RBP18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 GM2AP17900 193 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 PTPN9P43378 593 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 MAPK9P45984 424 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 RGRP47804 291 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 HDAC4P56524 1084 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 NOMO3P69849 1222 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 NOP9Q86U38 636 aaKnown RBP18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 ESX1Q8N693 406 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 TSEN2Q8NCE0 465 aaKnown RBP18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 GALNT11Q8NCW6 608 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 CPT1CQ8TCG5 803 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 PTCD2Q8WV60 388 aaKnown RBP18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 NCSTNQ92542 709 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 NTAN1Q96AB6 310 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 CINPQ9BW66 212 aaPredicted RBP18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 TEX101Q9BY14 249 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 FRMD8Q9BZ67 464 aaPredicted RBP18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 FBXO8Q9NRD0 319 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 KLHL3Q9UH77 587 aa18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 TMEM184BQ9Y519 407 aaPredicted RBP18.92■□□□□ 0.62
NCKIPSD-209ENST00000470006 ESPL1Q14674 2120 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 C2CD4BA6NLJ0 364 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 KATNA1O75449 491 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 RFPL1O75677 317 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 DLSTP36957 453 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 STAT5AP42229 794 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 CDK3Q00526 305 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 CRTC2Q53ET0 693 aaPredicted RBP18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 RAET1GQ6H3X3 334 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 ELOA2Q8IYF1 753 aaPredicted RBP18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 UMODL1-AS1Q8N2C9 162 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 CELF6Q96J87 481 aaKnown RBP18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 C11orf70Q9BRQ4 267 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 B4GALT6Q9UBX8 382 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 POLHQ9Y253 713 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 ST14Q9Y5Y6 855 aa18.91■□□□□ 0.62
NCKIPSD-209ENST00000470006 INPP4BO15327 924 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 PRAMEF11O60813 436 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 CSNK1DP48730 415 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 SCNN1BP51168 640 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 TPD52L1Q16890 204 aaPredicted RBP18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 ARHGAP22Q7Z5H3 698 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 FAM114A1Q8IWE2 563 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 SLC30A5Q8TAD4 765 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 PDCD6IPQ8WUM4 868 aaKnown RBP18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 CENPIQ92674 756 aaPredicted RBP18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 COQ10AQ96MF6 247 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 PDFQ9HBH1 243 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 PDP2Q9P2J9 529 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 RWDD2AQ9UIY3 292 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 TLK1Q9UKI8 766 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 FHOD1Q9Y613 1164 aa18.9■□□□□ 0.62
NCKIPSD-209ENST00000470006 PRRC2CQ9Y520 2896 aaKnown RBP18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 CDC14CA4D256 554 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 ARHGAP42A6NI28 874 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 PES1O00541 588 aaKnown RBP18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 SEMA7AO75326 666 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 MAP3K6O95382 1288 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 KRT3P12035 628 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 GPD1P21695 349 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 F8A1P23610 371 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 ETV3P41162 512 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 FOXM1Q08050 763 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 NFATC2Q13469 925 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 ZNF787Q6DD87 383 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 WDR74Q6RFH5 385 aaPredicted RBP18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 MARK2Q7KZI7 788 aaKnown RBP18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 SLC37A2Q8TED4 501 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 ECHDC3Q96DC8 303 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 OR2M4Q96R27 311 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 SELENOOQ9BVL4 669 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 ULBP3Q9BZM4 244 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 STN1Q9H668 368 aaKnown RBP18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 CASS4Q9NQ75 786 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 KCTD5Q9NXV2 234 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 DONSONQ9NYP3 566 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 TMEM98Q9Y2Y6 226 aa18.89■□□□□ 0.61
NCKIPSD-209ENST00000470006 WASH4PA8MWX3 477 aa18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 FGF10O15520 208 aaPredicted RBP18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 IVLP07476 585 aa18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 PRKCSHP14314 528 aaPredicted RBP18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 MMP8P22894 467 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms