RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 SUMF1Q8NBK3 374 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 PLA2G15Q8NCC3 412 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 GPR26Q8NDV2 337 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 MCUQ8NE86 351 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 OR13C4Q8NGS5 318 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 DNASE2BQ8WZ79 361 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 FOXJ1Q92949 421 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 SCAMP4Q969E2 229 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 DTD2Q96FN9 168 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 SLC6A18Q96N87 628 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 AGAP2Q99490 1192 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 SYBUQ9NX95 663 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.77□□□□□ -0.05
COL9A3-209ENST00000469852 IL17CQ9P0M4 197 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 SMG5Q9UPR3 1016 aaKnown RBP14.77□□□□□ -0.05
COL9A3-209ENST00000469852 K7ESM1 405 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 PSMD11O00231 422 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 CCL22O00626 93 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 RHOBTB1O94844 696 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 BPIP17213 487 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 CD27P26842 260 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 HMGCLP35914 325 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 MAGEA3P43357 314 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 SPINT3P49223 89 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 ZNF140P52738 457 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-209ENST00000469852 GUCY2DQ02846 1103 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 SGCGQ13326 291 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 SEPT6Q14141 434 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 MORF4L2Q15014 288 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 AGERQ15109 404 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 IRF4Q15306 451 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 TAF1AQ15573 450 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-209ENST00000469852 SETMARQ53H47 684 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-209ENST00000469852 SPDYCQ5MJ68 293 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 FNBP1LQ5T0N5 605 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 GCNT7Q6ZNI0 430 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 PCGF5Q86SE9 256 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 RGL4Q8IZJ4 473 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 ZCCHC9Q8N567 271 aaKnown RBP14.76□□□□□ -0.05
COL9A3-209ENST00000469852 TMEM145Q8NBT3 493 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 BRSK1Q8TDC3 778 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 SEC14L1Q92503 715 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 FUBP1Q96AE4 644 aaKnown RBP14.76□□□□□ -0.05
COL9A3-209ENST00000469852 CENPTQ96BT3 561 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 NUS1Q96E22 293 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 SERAC1Q96JX3 654 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 ZNF778Q96MU6 729 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 TRIM56Q9BRZ2 755 aaKnown RBP14.76□□□□□ -0.05
COL9A3-209ENST00000469852 RAB17Q9H0T7 212 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 MIR1-1HGQ9H1L0 117 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 ABCG8Q9H221 673 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 TRABDQ9H4I3 376 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 HACD3Q9P035 362 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 WHRNQ9P202 907 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 ANAPC5Q9UJX4 755 aa14.76□□□□□ -0.05
COL9A3-209ENST00000469852 UTP11Q9Y3A2 253 aaKnown RBP14.76□□□□□ -0.05
COL9A3-209ENST00000469852 TP53BP1Q12888 1972 aaPredicted RBP14.75□□□□□ -0.05
COL9A3-209ENST00000469852 DCHS1Q96JQ0 3298 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 WDR87Q6ZQQ6 2873 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 POM121BA6NF01 834 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 SOD1P00441 154 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 WNT1P04628 370 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 PCCBP05166 539 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 RHOXF2BP0C7M4 288 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 HNRNPA2B1P22626 353 aaKnown RBP14.75□□□□□ -0.05
COL9A3-209ENST00000469852 TMPRSS15P98073 1019 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 ALS2CLQ60I27 953 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 OR4K2Q8NGD2 314 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 ASB12Q8WXK4 309 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 PIGKQ92643 395 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 DNAJC1Q96KC8 554 aaKnown RBP14.75□□□□□ -0.05
COL9A3-209ENST00000469852 BMFQ96LC9 184 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 LENG8Q96PV6 779 aaPredicted RBP14.75□□□□□ -0.05
COL9A3-209ENST00000469852 RHOXF2Q9BQY4 288 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 WDR83Q9BRX9 315 aaKnown RBP14.75□□□□□ -0.05
COL9A3-209ENST00000469852 RIOK2Q9BVS4 552 aaKnown RBP14.75□□□□□ -0.05
COL9A3-209ENST00000469852 EPB41L5Q9HCM4 733 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 TM9SF3Q9HD45 589 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 SLC2A6Q9UGQ3 507 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 PILRBQ9UKJ0 227 aa14.75□□□□□ -0.05
COL9A3-209ENST00000469852 FNDC3AQ9Y2H6 1198 aaKnown RBP14.75□□□□□ -0.05
COL9A3-209ENST00000469852 GVINP1Q7Z2Y8 2422 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 MROH6A6NGR9 719 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 GAPDHSO14556 408 aaPredicted RBP14.74□□□□□ -0.05
COL9A3-209ENST00000469852 GPR39O43194 453 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 EPN2O95208 641 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 CRTAMO95727 393 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 MLNP12872 115 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 LPOP22079 712 aaPredicted RBP14.74□□□□□ -0.05
COL9A3-209ENST00000469852 CA5AP35218 305 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 NPY2RP49146 381 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 ARSDP51689 593 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 SARNPP82979 210 aaKnown RBP14.74□□□□□ -0.05
COL9A3-209ENST00000469852 LRRC14Q15048 493 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 CCDC6Q16204 474 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 GLE1Q53GS7 698 aaKnown RBP14.74□□□□□ -0.05
COL9A3-209ENST00000469852 WDR45BQ5MNZ6 344 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 TPRG1LQ5T0D9 272 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 TEX35Q5T0J7 233 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 HENMT1Q5T8I9 393 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms