RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 SLC16A5O15375 505 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 EPB41L2O43491 1005 aaKnown RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 LDB3O75112 727 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 GAGE7O76087 117 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 CAMTA2O94983 1202 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 GAS8-AS1O95177 125 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 MBD4O95243 580 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 SNRNP70P08621 437 aaKnown RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 HOXB5P09067 269 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 GAGE12FP0CL80 117 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 GAGE12GP0CL81 117 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 GAGE12IP0CL82 117 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 HSPA1AP0DMV8 641 aaKnown RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 HSPA1BP0DMV9 641 aaKnown RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 ZNF182P17025 639 aaPredicted RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 RRM1P23921 792 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 NFKBIAP25963 317 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 BDKRB2P30411 391 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 PBX3P40426 434 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 IL15P40933 162 aaPredicted RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 PIP4K2AP48426 406 aaPredicted RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 METAP2P50579 478 aaKnown RBP eCLIP3.18□□□□□ -1.9
TPR-204ENST00000469463 CLCNKAP51800 687 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 ERVFC1-1P60608 527 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 RPL7AP62424 266 aaKnown RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 OLR1P78380 273 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 FOXM1Q08050 763 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 TMEM115Q12893 351 aaPredicted RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 GAGE1Q13065 139 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 GAGE4Q13068 117 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 TBX2Q13207 712 aaPredicted RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 OASLQ15646 514 aaKnown RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 CCDC96Q2M329 555 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 PRICKLE4Q2TBC4 344 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 ZNF718Q3SXZ3 478 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 SETMARQ53H47 684 aaPredicted RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 KCNT1Q5JUK3 1230 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 C6orf141Q5SZD1 244 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 DUS1LQ6P1R4 473 aaKnown RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 PQLC2Q6ZP29 291 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 RBM23Q86U06 439 aaKnown RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 ODF3L1Q8IXM7 274 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 SPATA6LQ8N4H0 392 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 PDILTQ8N807 584 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 FRMD1Q8N878 549 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 ZNF114Q8NC26 417 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 OR2AK2Q8NG84 335 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 TANKQ92844 425 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 INTS12Q96CB8 462 aaKnown RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 HARBI1Q96MB7 349 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 ZNF385AQ96PM9 386 aaKnown RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 SLITRK1Q96PX8 696 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 NR1H4Q96RI1 486 aaPredicted RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 IL25Q9H293 177 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 PLEKHA4Q9H4M7 779 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 ESRP2Q9H6T0 727 aaKnown RBP3.18□□□□□ -1.9
TPR-204ENST00000469463 LRRC4Q9HBW1 653 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 RRP7BPQ9NSQ0 103 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 LOXL2Q9Y4K0 774 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 MAU2Q9Y6X3 613 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 UTYO14607 1347 aa3.18□□□□□ -1.9
TPR-204ENST00000469463 NPIPB15A6NHN6 443 aaPredicted RBP3.17□□□□□ -1.9
TPR-204ENST00000469463 SRRM3A6NNA2 597 aaPredicted RBP3.17□□□□□ -1.9
TPR-204ENST00000469463 ZNF432O94892 652 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 PPP1R3DO95685 299 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 LINC00271P0C7V0 271 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 AMD1P17707 334 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 MAOAP21397 527 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 KCNA5P22460 613 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 PAX3P23760 479 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 DDIT3P35638 169 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 RGS2P41220 211 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 SEC61BP60468 96 aaKnown RBP3.17□□□□□ -1.9
TPR-204ENST00000469463 RPS3AP61247 264 aaKnown RBP3.17□□□□□ -1.9
TPR-204ENST00000469463 CEBPZQ03701 1054 aaKnown RBP3.17□□□□□ -1.9
TPR-204ENST00000469463 MED22Q15528 200 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 GPATCH4Q5T3I0 446 aaKnown RBP3.17□□□□□ -1.9
TPR-204ENST00000469463 SIGIRRQ6IA17 410 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 FAM122CQ6P4D5 195 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 MAATS1Q7Z4T9 603 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 SLC9B2Q86UD5 537 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 CERS3Q8IU89 383 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 IL17REQ8NFR9 667 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 PSPC1Q8WXF1 523 aaKnown RBP3.17□□□□□ -1.9
TPR-204ENST00000469463 FAM149B1Q96BN6 582 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 RRNAD1Q96FB5 475 aaKnown RBP3.17□□□□□ -1.9
TPR-204ENST00000469463 SLC41A2Q96JW4 573 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 MTERF1Q99551 399 aaKnown RBP3.17□□□□□ -1.9
TPR-204ENST00000469463 FAM110AQ9BQ89 295 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 UNC45AQ9H3U1 944 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 FBRSL1Q9HCM7 1045 aaKnown RBP3.17□□□□□ -1.9
TPR-204ENST00000469463 TCF7L2Q9NQB0 619 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 ASAH2Q9NR71 780 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 C1RLQ9NZP8 487 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 DLGAP2Q9P1A6 1054 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 ORC3Q9UBD5 711 aaPredicted RBP3.17□□□□□ -1.9
TPR-204ENST00000469463 AASSQ9UDR5 926 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 ERRFI1Q9UJM3 462 aaPredicted RBP3.17□□□□□ -1.9
TPR-204ENST00000469463 TMEM98Q9Y2Y6 226 aa3.17□□□□□ -1.9
TPR-204ENST00000469463 AMDHD2Q9Y303 409 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms