RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CXCL12P48061 93 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 SPINT3P49223 89 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 LIG3P49916 1009 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 SFSWAPQ12872 951 aaKnown RBP14.33□□□□□ -0.12
COL6A1-202ENST00000463060 AGERQ15109 404 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 TTC31Q49AM3 519 aaPredicted RBP14.33□□□□□ -0.12
COL6A1-202ENST00000463060 ZNF449Q6P9G9 518 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 KIAA1324Q6UXG2 1013 aaKnown RBP14.33□□□□□ -0.12
COL6A1-202ENST00000463060 MICALCLQ6ZW33 695 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.33□□□□□ -0.12
COL6A1-202ENST00000463060 GPR26Q8NDV2 337 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 DTX3LQ8TDB6 740 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 HDAC10Q969S8 669 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 PBXIP1Q96AQ6 731 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 ZNF669Q96BR6 464 aaPredicted RBP14.33□□□□□ -0.12
COL6A1-202ENST00000463060 HHIPQ96QV1 700 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 IL26Q9NPH9 171 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 SMYD2Q9NRG4 433 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 ARGLU1Q9NWB6 273 aaPredicted RBP14.33□□□□□ -0.12
COL6A1-202ENST00000463060 NFKBIL1Q9UBC1 381 aaPredicted RBP14.33□□□□□ -0.12
COL6A1-202ENST00000463060 ZFR2Q9UPR6 939 aaKnown RBP14.33□□□□□ -0.12
COL6A1-202ENST00000463060 NCKAP1Q9Y2A7 1128 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 NFS1Q9Y697 457 aa14.33□□□□□ -0.12
COL6A1-202ENST00000463060 NUMA1Q14980 2115 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 CCDC162PA2VCL2 907 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 CCL22O00626 93 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 MMP20O60882 483 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 NUDT17P0C025 328 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 ACADMP11310 421 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 TDGF1P13385 188 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 HADHAP40939 763 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 ADPRHP54922 357 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 PEX6Q13608 980 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 ARHGEF7Q14155 803 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 LONRF1Q17RB8 773 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 TMEM259Q4ZIN3 620 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 ANO7Q6IWH7 933 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 NEK5Q6P3R8 708 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 Q6ZVL8 140 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 CYP2U1Q7Z449 544 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 NLRP8Q86W28 1048 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 FBF1Q8TES7 1133 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 CERS2Q96G23 380 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 WRAP53Q9BUR4 548 aaKnown RBP14.32□□□□□ -0.12
COL6A1-202ENST00000463060 C1QTNF2Q9BXJ5 285 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 ACSS3Q9H6R3 686 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 SUDS3Q9H7L9 328 aaPredicted RBP14.32□□□□□ -0.12
COL6A1-202ENST00000463060 PREBQ9HCU5 417 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 BPIFA1Q9NP55 256 aa14.32□□□□□ -0.12
COL6A1-202ENST00000463060 ZNF106Q9H2Y7 1883 aaKnown RBP14.31□□□□□ -0.12
COL6A1-202ENST00000463060 AGAP14A8MT82 685 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 VAPBO95292 243 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 ELFN1P0C7U0 828 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 C6P13671 934 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 ACSL1P33121 698 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 CCR3P51677 355 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 DCDC1P59894 354 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 TMPRSS15P98073 1019 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 MAP7D1Q3KQU3 841 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 TEDDM1Q5T9Z0 273 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 CAPN12Q6ZSI9 719 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 NRSN1Q8IZ57 195 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 MAML2Q8IZL2 1156 aaPredicted RBP14.31□□□□□ -0.12
COL6A1-202ENST00000463060 TMEM105Q8N8V8 129 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 GPR150Q8NGU9 434 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 OR14C36Q8NHC7 312 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 UBLCP1Q8WVY7 318 aaPredicted RBP14.31□□□□□ -0.12
COL6A1-202ENST00000463060 DTD2Q96FN9 168 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 PLEKHG4BQ96PX9 1271 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 CDH19Q9H159 772 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 VPS37BQ9H9H4 285 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 SGK2Q9HBY8 427 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 PRMT8Q9NR22 394 aaPredicted RBP14.31□□□□□ -0.12
COL6A1-202ENST00000463060 ZNF446Q9NWS9 450 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 WSB2Q9NYS7 404 aaPredicted RBP14.31□□□□□ -0.12
COL6A1-202ENST00000463060 FKBPLQ9UIM3 349 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 PKP3Q9Y446 797 aa14.31□□□□□ -0.12
COL6A1-202ENST00000463060 CACNA1IQ9P0X4 2223 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 A0A087WUV0 522 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-202ENST00000463060 TRBV5-4A0A0C4DH59 114 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 CCDC163A0A0D9SF12 145 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 IGLON5A6NGN9 336 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 OR51F1A6NGY5 319 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 CXorf49A8MYA2 514 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-202ENST00000463060 TNFRSF10AO00220 468 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 WNT9AO14904 365 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 ZNF217O75362 1048 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 TCEA3O75764 348 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 RECQL5O94762 991 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-202ENST00000463060 GOT2P00505 430 aaKnown RBP14.3□□□□□ -0.12
COL6A1-202ENST00000463060 SHBGP04278 402 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 ERVK-10P10266 1014 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 PAMP19021 973 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 GCAP28676 217 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 FOXN2P32314 431 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 PHBP35232 272 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 ETV3P41162 512 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 MGAT5Q09328 741 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 FGL2Q14314 439 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 CASP8Q14790 479 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms