RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ABHD8Q96I13 439 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 IGSF21Q96ID5 467 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 HSFY1Q96LI6 401 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 ALS2CR12Q96Q35 445 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 TMEM209Q96SK2 561 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 SMOQ99835 787 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 GPATCH1Q9BRR8 931 aaKnown RBP5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 MED10Q9BTT4 135 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 HTATIP2Q9BUP3 242 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 TUBB2BQ9BVA1 445 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 UBXN6Q9BZV1 441 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 MIS12Q9H081 205 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 GOLPH3Q9H4A6 298 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 EPS8L2Q9H6S3 715 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 LDAHQ9H6V9 325 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 L2HGDHQ9H9P8 463 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 MRPL47Q9HD33 250 aaKnown RBP5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 TMEM140Q9NV12 185 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 TMLHEQ9NVH6 421 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 SIDT1Q9NXL6 827 aaKnown RBP5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 GALNT8Q9NY28 637 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 WDR35Q9P2L0 1181 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 CA14Q9ULX7 337 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 ALG6Q9Y672 507 aa5.3□□□□□ -1.56
HMGB1P4-201ENST00000455362 CHD7Q9P2D1 2997 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 C17orf113A0A1B0GUU1 675 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 OR6C75A6NL08 312 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 TMEM110-MUSTN1A8MSY1 372 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 HHLA1C9JL84 531 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 E5RJQ4 531 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 GOLGA8SH3BPF8 625 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 H7C4K7 107 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 XPO1O14980 1071 aaKnown RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 PAPSS1O43252 624 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 COQ9O75208 318 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 PROSCO94903 275 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 GJB5O95377 273 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 MATN4O95460 622 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 PROCP04070 461 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 AMY1AP04745 511 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 KRT3P12035 628 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 PECAM1P16284 738 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 STMN1P16949 149 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 BTF3P20290 206 aaKnown RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 COMTP21964 271 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 TGM1P22735 817 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 PSMA4P25789 261 aaKnown RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 ACVR2AP27037 513 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 ATP5DP30049 168 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 AKT1P31749 480 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 RFC1P35251 1148 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 MSH2P43246 934 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 ACADSBP45954 432 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 RGS7P49802 495 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 CDR1P51861 262 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 CACNA2D1P54289 1103 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 MLLT6P55198 1093 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 GSCP56915 257 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 SLC8A3P57103 927 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 CTXN1P60606 82 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 RPL7AP62424 266 aaKnown RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 POU6F2P78424 691 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 PPARDQ03181 441 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 TAP1Q03518 808 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 RPS6KA1Q15418 735 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 CPSF6Q16630 551 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 USP41Q3LFD5 358 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 SPOUT1Q5T280 376 aaKnown RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 FAM69AQ5T7M9 428 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 FAXCQ5TGI0 409 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 FYB2Q5VWT5 728 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 RNF43Q68DV7 783 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 OR6B2Q6IFH4 312 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 DNAJC24Q6P3W2 148 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 PLBD1Q6P4A8 553 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 PSRC1Q6PGN9 363 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 DCUN1D2Q6PH85 259 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 CLEC20AQ6ZU45 233 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 FAM183BPQ6ZVS7 135 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 PEX26Q7Z412 305 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 SZRD1Q7Z422 152 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 PXKQ7Z7A4 578 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 CD163Q86VB7 1156 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 PIGZQ86VD9 579 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 CEP57Q86XR8 500 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 ZDHHC17Q8IUH5 632 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 RASGRP3Q8IV61 690 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 CCDC28AQ8IWP9 274 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 RNF168Q8IYW5 571 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 DCP1BQ8IZD4 617 aaKnown RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 OR8H3Q8N146 312 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 SLC39A11Q8N1S5 342 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 FAM181AQ8N9Y4 354 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 COLGALT1Q8NBJ5 622 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 KCTD6Q8NC69 237 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 OR5AN1Q8NGI8 311 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 GOT1L1Q8NHS2 421 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 PHOSPHO2Q8TCD6 241 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 NETO1Q8TDF5 533 aa5.29□□□□□ -1.56
HMGB1P4-201ENST00000455362 ZNF480Q8WV37 535 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms