RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 ATP12AP54707 1039 aa11.72□□□□□ -0.53
FN1-212ENST00000446046 CDK18Q07002 472 aa11.72□□□□□ -0.53
FN1-212ENST00000446046 OVGP1Q12889 678 aa11.72□□□□□ -0.53
FN1-212ENST00000446046 VARS2Q5ST30 1063 aaKnown RBP11.72□□□□□ -0.53
FN1-212ENST00000446046 PPP1R26Q5T8A7 1209 aaPredicted RBP11.72□□□□□ -0.53
FN1-212ENST00000446046 C7orf57Q8NEG2 295 aa11.72□□□□□ -0.53
FN1-212ENST00000446046 DDHD1Q8NEL9 900 aa11.72□□□□□ -0.53
FN1-212ENST00000446046 ZNF354BQ96LW1 612 aa11.72□□□□□ -0.53
FN1-212ENST00000446046 CLDN5O00501 218 aa11.72□□□□□ -0.53
FN1-212ENST00000446046 NBNO60934 754 aa11.72□□□□□ -0.53
FN1-212ENST00000446046 CYB5AP00167 134 aa11.72□□□□□ -0.53
FN1-212ENST00000446046 ITPKBP27987 946 aa11.72□□□□□ -0.53
FN1-212ENST00000446046 CPA2P48052 419 aa11.72□□□□□ -0.53
FN1-212ENST00000446046 C15orf59Q2T9L4 293 aaPredicted RBP11.72□□□□□ -0.53
FN1-212ENST00000446046 INPP4AQ96PE3 977 aaPredicted RBP11.72□□□□□ -0.53
FN1-212ENST00000446046 SMAD5Q99717 465 aaKnown RBP11.72□□□□□ -0.53
FN1-212ENST00000446046 RHOQP17081 205 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 GOT1P17174 413 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 ALAS2P22557 587 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 IL12BP29460 328 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 COLEC12Q5KU26 742 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 NOA1Q8NC60 698 aaKnown RBP11.71□□□□□ -0.53
FN1-212ENST00000446046 PPCDCQ96CD2 204 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 RNF145Q96MT1 663 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 SMURF2Q9HAU4 748 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 KDM3BQ7LBC6 1761 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 SLC28A2O43868 658 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 FSHRP23945 695 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 ALLCQ8N6M5 410 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 PCDH12Q9NPG4 1184 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 GLYATL1P3A0A0U1RQE8 302 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 FAM86C2PA6NEL3 165 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 PRMT5O14744 637 aaPredicted RBP11.71□□□□□ -0.53
FN1-212ENST00000446046 IPO13O94829 963 aaKnown RBP11.71□□□□□ -0.53
FN1-212ENST00000446046 CACNG1Q06432 222 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 FBXO42Q6P3S6 717 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 UBE2R2Q712K3 238 aaPredicted RBP11.71□□□□□ -0.53
FN1-212ENST00000446046 MTDHQ86UE4 582 aaKnown RBP11.71□□□□□ -0.53
FN1-212ENST00000446046 PROSER1Q86XN7 944 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 PIK3C3Q8NEB9 887 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 CSPG4P5Q96PW8 444 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 MRPL39Q9NYK5 338 aaKnown RBP11.71□□□□□ -0.53
FN1-212ENST00000446046 NUDT5Q9UKK9 219 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 LAMB1P07942 1786 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 NDST3O95803 873 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 NQO1P15559 274 aaKnown RBP11.71□□□□□ -0.53
FN1-212ENST00000446046 BMT2Q1RMZ1 405 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 HAO1Q9UJM8 370 aa11.71□□□□□ -0.53
FN1-212ENST00000446046 FPGTO14772 594 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 MATN4O95460 622 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 C22orf31O95567 290 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 C8AP07357 584 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 TFPIP10646 304 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 SSTR1P30872 391 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 ARHGDIBP52566 201 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 CDC42P60953 191 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 CAP1Q01518 475 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 TNK2Q07912 1038 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 PRR23BQ6ZRT6 265 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 DUSP10Q9Y6W6 482 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 TNFP01375 233 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 PRKG2Q13237 762 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 ZNF697Q5TEC3 545 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 RTL3Q8N8U3 475 aaKnown RBP11.71□□□□□ -0.54
FN1-212ENST00000446046 SPAG4Q9NPE6 437 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 DZANK1Q9NVP4 752 aa11.71□□□□□ -0.54
FN1-212ENST00000446046 NT5C1B-RDH14C9J2C7 533 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 TNFAIP8O95379 198 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 ABHD2P08910 425 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 RARAP10276 462 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 PSMD7P51665 324 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 VPS26BQ4G0F5 336 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 INTS6LQ5JSJ4 861 aaKnown RBP11.7□□□□□ -0.54
FN1-212ENST00000446046 TMPRSS11BQ86T26 416 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 SLC30A8Q8IWU4 369 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 C12orf29Q8N999 325 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 TSTD1Q8NFU3 115 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 HDAC10Q969S8 669 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 HAPLN3Q96S86 360 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 FNDC11Q9BVV2 318 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 AGO3Q9H9G7 860 aaKnown RBP11.7□□□□□ -0.54
FN1-212ENST00000446046 ELL3Q9HB65 397 aaPredicted RBP11.7□□□□□ -0.54
FN1-212ENST00000446046 IRAK3Q9Y616 596 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 ATP6V1B1P15313 513 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 LCLAT1Q6UWP7 414 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 CFAP206Q8IYR0 622 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 ZNF276Q8N554 614 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 USP6NLQ92738 828 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 SGK2Q9HBY8 427 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 MTF2Q9Y483 593 aaPredicted RBP11.7□□□□□ -0.54
FN1-212ENST00000446046 GRIN2DO15399 1336 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 E9PAM4 449 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 CLPTM1O96005 669 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 ERCC2P18074 760 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 SPATA19Q7Z5L4 167 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 OR10H5Q8NGA6 315 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 MDM1Q8TC05 714 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 HDAC7Q8WUI4 952 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 ANKRD63C9JTQ0 380 aa11.7□□□□□ -0.54
FN1-212ENST00000446046 RFXANKO14593 260 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms