RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 ECEL1O95672 775 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 CER1O95813 267 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 SLC4A1P02730 911 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 SPINT3P49223 89 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 BASP1P80723 227 aaKnown RBP18.24■□□□□ 0.51
PTX4-202ENST00000440447 HLA-BQ31612 363 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 DENND5AQ6IQ26 1287 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 ESRP1Q6NXG1 681 aaKnown RBP18.24■□□□□ 0.51
PTX4-202ENST00000440447 RFLNAQ6ZTI6 216 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 ZNF765Q7L2R6 523 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 GLT6D1Q7Z4J2 308 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 MINDY1Q8N5J2 469 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 PLA2G15Q8NCC3 412 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 ZNF592Q92610 1267 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 AP2M1Q96CW1 435 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 RUNDC3BQ96NL0 473 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 DDX47Q9H0S4 455 aaKnown RBP18.24■□□□□ 0.51
PTX4-202ENST00000440447 ABCG8Q9H221 673 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 GAREM1Q9H706 876 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 TMEM9BQ9NQ34 198 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 RAD18Q9NS91 495 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 RXFP3Q9NSD7 469 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 CD84Q9UIB8 345 aa18.24■□□□□ 0.51
PTX4-202ENST00000440447 EP300Q09472 2414 aaPredicted RBP18.23■□□□□ 0.51
PTX4-202ENST00000440447 AURKAO14965 403 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 GDF9O60383 454 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 APRTP07741 180 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 TSHRP16473 764 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 VPS41P49754 854 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 THOP1P52888 689 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 ARHGAP8P85298 464 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 DPTQ07507 201 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 GPS1Q13098 491 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 PTK2BQ14289 1009 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 PNCKQ6P2M8 343 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 PPP1R21Q6ZMI0 780 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 KDM7AQ6ZMT4 941 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 NLRP8Q86W28 1048 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 SPATS2Q86XZ4 545 aaKnown RBP18.23■□□□□ 0.51
PTX4-202ENST00000440447 KLHL7Q8IXQ5 586 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 EID2BQ96D98 161 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 APOOQ9BUR5 198 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 FAM83DQ9H4H8 585 aa18.23■□□□□ 0.51
PTX4-202ENST00000440447 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.22■□□□□ 0.51
PTX4-202ENST00000440447 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.22■□□□□ 0.51
PTX4-202ENST00000440447 C2orf81A6NN90 581 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 DFNA5O60443 496 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 SUN1O94901 812 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 PYGLP06737 847 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 HMGCLP35914 325 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 GPR1P46091 355 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 CDH17Q12864 832 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 PDE1CQ14123 709 aaPredicted RBP18.22■□□□□ 0.51
PTX4-202ENST00000440447 PPP1R7Q15435 360 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 ZNF423Q2M1K9 1284 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 RAET1GQ6H3X3 334 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 SLC22A18ASQ8N1D0 253 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 TTC30BQ8N4P2 665 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 OXR1Q8N573 874 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 DNAAF3Q8N9W5 541 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 BRSK1Q8TDC3 778 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 SCAMP4Q969E2 229 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 ELF4Q99607 663 aaPredicted RBP18.22■□□□□ 0.51
PTX4-202ENST00000440447 RIOK2Q9BVS4 552 aaKnown RBP18.22■□□□□ 0.51
PTX4-202ENST00000440447 CDH19Q9H159 772 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 ERVMER34-1Q9H9K5 563 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 EIF2B3Q9NR50 452 aaKnown RBP18.22■□□□□ 0.51
PTX4-202ENST00000440447 GPR27Q9NS67 375 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 PCYOX1Q9UHG3 505 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 OR1A2Q9Y585 309 aa18.22■□□□□ 0.51
PTX4-202ENST00000440447 RIF1Q5UIP0 2472 aaKnown RBP18.22■□□□□ 0.51
PTX4-202ENST00000440447 SPTY2D1-AS1A0A0U1RR47 76 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 K7ESM1 405 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 CACNB4O00305 520 aaPredicted RBP18.21■□□□□ 0.51
PTX4-202ENST00000440447 CDX4O14627 284 aaPredicted RBP18.21■□□□□ 0.51
PTX4-202ENST00000440447 URI1O94763 535 aaPredicted RBP18.21■□□□□ 0.51
PTX4-202ENST00000440447 CRTAMO95727 393 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 HTR1BP28222 390 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 TEAD1P28347 426 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 TRIM23P36406 574 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 TAF1AQ15573 450 aaPredicted RBP18.21■□□□□ 0.51
PTX4-202ENST00000440447 KCTD19Q17RG1 926 aaPredicted RBP18.21■□□□□ 0.51
PTX4-202ENST00000440447 PRAMEF14Q5SWL7 426 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 STPG1Q5TH74 334 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 PELI3Q8N2H9 469 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 OR52K1Q8NGK4 314 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 OR2I1PQ8NGU4 316 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 WDR26Q9H7D7 661 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 BPIFA1Q9NP55 256 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.21■□□□□ 0.51
PTX4-202ENST00000440447 NEU2Q9Y3R4 380 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 PKP3Q9Y446 797 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 RALGAPA1Q6GYQ0 2036 aa18.21■□□□□ 0.51
PTX4-202ENST00000440447 C4orf47A7E2U8 309 aa18.2■□□□□ 0.5
PTX4-202ENST00000440447 STX7O15400 261 aaKnown RBP18.2■□□□□ 0.5
PTX4-202ENST00000440447 HOXC4P09017 264 aaPredicted RBP18.2■□□□□ 0.5
PTX4-202ENST00000440447 BPIP17213 487 aa18.2■□□□□ 0.5
PTX4-202ENST00000440447 TPH1P17752 444 aa18.2■□□□□ 0.5
PTX4-202ENST00000440447 LPOP22079 712 aaPredicted RBP18.2■□□□□ 0.5
PTX4-202ENST00000440447 HOXD11P31277 338 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms