RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ACTL9Q8TC94 416 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 HTR3CQ8WXA8 447 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 TRIB3Q96RU7 358 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 MLPHQ9BV36 600 aaPredicted RBP23.62■■□□□ 1.37
VARS-217ENST00000440048 LRRC61Q9BV99 259 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 DUSP23Q9BVJ7 150 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 LGR4Q9BXB1 951 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 TSGA10Q9BZW7 698 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 WDR26Q9H7D7 661 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 KLQ9UEF7 1012 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 MSRB2Q9Y3D2 182 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 PLXNB3Q9ULL4 1909 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 FAM221BA6H8Z2 402 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 TMEM202A6NGA9 273 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 RASGRP1O95267 797 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 CLDN7O95471 211 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 TSHRP16473 764 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 BLKP51451 505 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 OTUD4Q01804 1114 aaKnown RBP23.61■■□□□ 1.37
VARS-217ENST00000440048 PCSK7Q16549 785 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 CDKN3Q16667 212 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 KCTD16Q68DU8 428 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 UNQ6494/PRO21346Q6UXR6 183 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 RD3Q7Z3Z2 195 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 LRRC8AQ8IWT6 810 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 ZNF567Q8N184 647 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 VAT1Q99536 393 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 CLPBQ9H078 707 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 ABCG8Q9H221 673 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 C10orf88Q9H8K7 445 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 KLHL8Q9P2G9 620 aaPredicted RBP23.61■■□□□ 1.37
VARS-217ENST00000440048 CD84Q9UIB8 345 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 GUCA1BQ9UMX6 200 aa23.61■■□□□ 1.37
VARS-217ENST00000440048 GOLGA6CA6NDK9 693 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 GOLGA6BA6NDN3 693 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 TMEM8BA6NDV4 472 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 RFPL3O75679 317 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 TJP3O95049 919 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 GOLGA6DP0CG33 693 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 NFKB1P19838 968 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 ACP1P24666 158 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 RBL1P28749 1068 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 CDK18Q07002 472 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 DPTQ07507 201 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 DEFB133Q30KQ1 61 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 DHRS13Q6UX07 377 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 PID1Q7Z2X4 250 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 HEATR4Q86WZ0 1026 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 FAM181AQ8N9Y4 354 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 OR56A4Q8NGH8 313 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 OR1E3Q8WZA6 343 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 PDXPQ96GD0 296 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 HES6Q96HZ4 224 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 APOLD1Q96LR9 279 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 TEX101Q9BY14 249 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 FGF22Q9HCT0 170 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 PHPT1Q9NRX4 125 aaPredicted RBP23.6■■□□□ 1.37
VARS-217ENST00000440048 GOLGA6AQ9NYA3 693 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 UBP1Q9NZI7 540 aa23.6■■□□□ 1.37
VARS-217ENST00000440048 ANKRD11Q6UB99 2663 aaPredicted RBP23.59■■□□□ 1.37
VARS-217ENST00000440048 C1orf232A0A0U1RR37 186 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 LMO7DNF2Z398 122 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 TPP1O14773 563 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 KRT86O43790 486 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 PMPCBO75439 489 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 CELA2BP08218 269 aaPredicted RBP23.59■■□□□ 1.37
VARS-217ENST00000440048 MYF5P13349 255 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 KELP23276 732 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 TEAD1P28347 426 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 DAB2P98082 770 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 RAET1GQ6H3X3 334 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 AP2M1Q96CW1 435 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 FAM118BQ9BPY3 351 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 GRPEL1Q9HAV7 217 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 DGKBQ9Y6T7 804 aa23.59■■□□□ 1.37
VARS-217ENST00000440048 LY6G6EA0A0G2JKS1 128 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 PDE2AO00408 941 aaPredicted RBP23.58■■□□□ 1.37
VARS-217ENST00000440048 TNFRSF10CO14798 259 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 TNFP01375 233 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 MYCLP1P12525 358 aaPredicted RBP23.58■■□□□ 1.37
VARS-217ENST00000440048 CKMT1AP12532 417 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 CTSEP14091 401 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 EIF3EP60228 445 aaKnown RBP23.58■■□□□ 1.37
VARS-217ENST00000440048 CCZ1BP86790 482 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 CCZ1P86791 482 aaPredicted RBP23.58■■□□□ 1.37
VARS-217ENST00000440048 ILKQ13418 452 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 ZCCHC8Q6NZY4 707 aaKnown RBP23.58■■□□□ 1.37
VARS-217ENST00000440048 ZNF765Q7L2R6 523 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 TMPRSS7Q7RTY8 843 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 NLRP8Q86W28 1048 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 RAVER1Q8IY67 606 aaKnown RBP23.58■■□□□ 1.37
VARS-217ENST00000440048 NRSN1Q8IZ57 195 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 FSTL5Q8N475 847 aaPredicted RBP23.58■■□□□ 1.37
VARS-217ENST00000440048 SCAMP4Q969E2 229 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 FCRL5Q96RD9 977 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 MRPL40Q9NQ50 206 aaKnown RBP23.58■■□□□ 1.37
VARS-217ENST00000440048 FAM153AQ9UHL3 310 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 TRHDEQ9UKU6 1024 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 U3KQA8 63 aa23.58■■□□□ 1.37
VARS-217ENST00000440048 F5H423 210 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms