RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 RBM15Q96T37 977 aaKnown RBP eCLIP10.46□□□□□ -0.73
MCF2L-216ENST00000439475 DESI2Q9BSY9 194 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 CEP41Q9BYV8 373 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 CNTNAP3Q9BZ76 1288 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 RAD18Q9NS91 495 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 SAE1Q9UBE0 346 aaPredicted RBP10.46□□□□□ -0.73
MCF2L-216ENST00000439475 FAM153AQ9UHL3 310 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 KLF15Q9UIH9 416 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 WASF3Q9UPY6 502 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 DGKBQ9Y6T7 804 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 ARID1BQ8NFD5 2236 aaPredicted RBP10.46□□□□□ -0.74
MCF2L-216ENST00000439475 C1orf232A0A0U1RR37 186 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 TMEM8BA6NDV4 472 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 LMO7DNF2Z398 122 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 STK10O94804 968 aaKnown RBP10.45□□□□□ -0.74
MCF2L-216ENST00000439475 CLDN7O95471 211 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 PRLP01236 227 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 EPOP01588 193 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 PROS1P07225 676 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 GIMD1P0DJR0 217 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 MYCLP1P12525 358 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-216ENST00000439475 PECAM1P16284 738 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-216ENST00000439475 PTPN7P35236 360 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 ETV3P41162 512 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 MARCKSL1P49006 195 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 STC1P52823 247 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 PTSQ03393 145 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 PRPSAP1Q14558 356 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 NOMO1Q15155 1222 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 NR0B2Q15466 257 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 SMAD1Q15797 465 aaKnown RBP10.45□□□□□ -0.74
MCF2L-216ENST00000439475 PCSK7Q16549 785 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 QPCTQ16769 361 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 ALG11Q2TAA5 492 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 DEFB133Q30KQ1 61 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 ITPRIPL1Q6GPH6 555 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 UNQ6494/PRO21346Q6UXR6 183 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 CCNI2Q6ZMN8 369 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-216ENST00000439475 B4GALNT4Q76KP1 1039 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 TSPAN33Q86UF1 283 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 CDKL3Q8IVW4 592 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-216ENST00000439475 CACTIN-AS1Q8N1I8 211 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 LRRC57Q8N9N7 239 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 OR6C4Q8NGE1 309 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 NAT6Q93015 286 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 FCRL5Q96RD9 977 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 LRRC61Q9BV99 259 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 TEX101Q9BY14 249 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 CDH19Q9H159 772 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 ABCG4Q9H172 646 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 ABCG8Q9H221 673 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 FAM83DQ9H4H8 585 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 ZFYVE1Q9HBF4 777 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 MAGEE1Q9HCI5 957 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 KLK13Q9UKR3 277 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 GUCA1BQ9UMX6 200 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 ADGRG1Q9Y653 693 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 SPTBN2O15020 2390 aa10.45□□□□□ -0.74
MCF2L-216ENST00000439475 CPED1A4D0V7 1026 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 EME2A4GXA9 379 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-216ENST00000439475 TMEM202A6NGA9 273 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 YY2O15391 372 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 PMPCBO75439 489 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 NDST3O95803 873 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 MT-CYBP00156 380 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-216ENST00000439475 GP1BAP07359 652 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 MMP2P08253 660 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 CCDC175P0C221 793 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 RBP3P10745 1247 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 PYGMP11217 842 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 GM2AP17900 193 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 RBL1P28749 1068 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 SPINT3P49223 89 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 GEMP55040 296 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 EIF3EP60228 445 aaKnown RBP10.44□□□□□ -0.74
MCF2L-216ENST00000439475 CDK3Q00526 305 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 OTUD4Q01804 1114 aaKnown RBP10.44□□□□□ -0.74
MCF2L-216ENST00000439475 ADCY2Q08462 1091 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 MPP3Q13368 585 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 GALNT3Q14435 633 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 C6orf132Q5T0Z8 1188 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 DARS2Q6PI48 645 aaKnown RBP10.44□□□□□ -0.74
MCF2L-216ENST00000439475 KDM7AQ6ZMT4 941 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 KDELC2Q7Z4H8 507 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 TAF8Q7Z7C8 310 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 HEATR4Q86WZ0 1026 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 LRRC8AQ8IWT6 810 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 WDR48Q8TAF3 677 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 ACTL9Q8TC94 416 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 PPP1R2P1Q96PQ5 205 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 QKIQ96PU8 341 aaKnown RBP eCLIP10.44□□□□□ -0.74
MCF2L-216ENST00000439475 GSDMCQ9BYG8 508 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 GPR63Q9BZJ6 419 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 TCEAL2Q9H3H9 227 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-216ENST00000439475 CYP4F12Q9HCS2 524 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 GULP1Q9UBP9 304 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 RSPH14Q9UHP6 348 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 CD84Q9UIB8 345 aa10.44□□□□□ -0.74
MCF2L-216ENST00000439475 AAR2Q9Y312 384 aaKnown RBP10.44□□□□□ -0.74
MCF2L-216ENST00000439475 PRSS38A1L453 326 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms