RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 C22orf39Q6P5X5 142 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 TMC3Q7Z5M5 1100 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 GALNT13Q8IUC8 556 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 FERD3LQ96RJ6 166 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 A0A096LPK6 155 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 MLNP12872 115 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 TEDDM1Q5T9Z0 273 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 UNC5AQ6ZN44 842 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 FBXO39Q8N4B4 442 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 CMASQ8NFW8 434 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 BTBD1Q9H0C5 482 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 CYTH4Q9UIA0 394 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 TMEM59LQ9UK28 342 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 SMNDC1O75940 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 DLDP09622 509 aaKnown RBP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 SLC2A4P14672 509 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 CCNG1P51959 295 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 PLA2G4EQ3MJ16 856 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 BEND7Q8N7W2 519 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 CWH43Q9H720 699 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 GEMIN8Q9NWZ8 242 aaKnown RBP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 ARL15Q9NXU5 204 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 TPST1O60507 370 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 TCF4P15884 667 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 USP39Q53GS9 565 aaKnown RBP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 ARCQ7LC44 396 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 ZNF366Q8N895 744 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 AENQ8WTP8 325 aaKnown RBP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 STYXQ8WUJ0 223 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 PPP1R14AQ96A00 147 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 FAR2Q96K12 515 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 ACTR8Q9H981 624 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 TCRBV7S2A1N4TA0A589 114 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 AVILO75366 819 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 UBTFL6P0CB48 400 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 XKR4Q5GH76 650 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 TRMT2BQ96GJ1 504 aaKnown RBP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 PIWIL1Q96J94 861 aaKnown RBP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 MRPL40Q9NQ50 206 aaKnown RBP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 VPS51Q9UID3 782 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 N6AMT1Q9Y5N5 214 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 SKIV2L2P42285 1042 aaKnown RBP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 CYP2A13Q16696 494 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 CCDC153Q494R4 210 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 BRAT1Q6PJG6 821 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 MRPL1Q9BYD6 325 aaKnown RBP12.92□□□□□ -0.34
PTCH1-207ENST00000429896 SLC2A11Q9BYW1 496 aa12.92□□□□□ -0.34
PTCH1-207ENST00000429896 TRPC5OSA6NMA1 111 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 ADAM12O43184 909 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 CCDC22O60826 627 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 BANF1O75531 89 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 RASGRP1O95267 797 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 CHI3L1P36222 383 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-207ENST00000429896 INPP5AQ14642 412 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 PHKG1Q16816 387 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 C14orf80Q86SX3 495 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 PRPF18Q99633 342 aaKnown RBP12.91□□□□□ -0.34
PTCH1-207ENST00000429896 SOHLH2Q9NX45 425 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 GULP1Q9UBP9 304 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 J3KR12 359 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 CPA3P15088 417 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 SLC41A1Q8IVJ1 513 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 PBX4Q9BYU1 374 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 ABCG4Q9H172 646 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 TMBIM4Q9HC24 238 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 FBXL12Q9NXK8 326 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 TCRBV21S2A2A0A5A6 115 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 CYP7B1O75881 506 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 KAT7O95251 611 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 PIGNO95427 931 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 ABCE1P61221 599 aaKnown RBP12.91□□□□□ -0.34
PTCH1-207ENST00000429896 RALGPS1Q5JS13 557 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 KIAA0319Q5VV43 1072 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 SPATA21Q7Z572 469 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 REPS1Q96D71 796 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 NUS1Q96E22 293 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 ELOVL2Q9NXB9 296 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 IGSF9Q9P2J2 1179 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 SLC27A6Q9Y2P4 619 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 CFAP73A6NFT4 308 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 MT-CYBP00156 380 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-207ENST00000429896 MAPK1P28482 360 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 LMAN2Q12907 356 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 TAF1AQ15573 450 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-207ENST00000429896 GPSM1Q86YR5 675 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 ATL1Q8WXF7 558 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 ELOVL6Q9H5J4 265 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 CAB39Q9Y376 341 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-207ENST00000429896 IDSP22304 550 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 PBX2P40425 430 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 SLC10A7Q0GE19 358 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 OVGP1Q12889 678 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 MSANTD2Q6P1R3 559 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 ILKAPQ9H0C8 392 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-207ENST00000429896 CHUKO15111 745 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 HLA-EP13747 358 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 RPS7P62081 194 aaKnown RBP12.91□□□□□ -0.34
PTCH1-207ENST00000429896 PON2Q15165 354 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 PLEKHG6Q3KR16 790 aa12.91□□□□□ -0.34
PTCH1-207ENST00000429896 DUPD1Q68J44 220 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms