RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 CBLBQ13191 982 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 THOC5Q13769 683 aaKnown RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 LONRF1Q17RB8 773 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 ZNF284Q2VY69 593 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TMEM52BQ4KMG9 183 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 UBAP2Q5T6F2 1119 aaKnown RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 SEL1L3Q68CR1 1132 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TBC1D3GQ6DHY5 549 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 KIAA0930Q6ICG6 404 aaPredicted RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TBC1D3CQ6IPX1 549 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 KIAA1161Q6NSJ0 714 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 ESRP1Q6NXG1 681 aaKnown RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TRMT10BQ6PF06 316 aaKnown RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TSSK4Q6SA08 328 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 FAM151BQ6UXP7 276 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 LIPIQ6XZB0 460 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 C3orf62Q6ZUJ4 267 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TMEM135Q86UB9 458 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 KCNMB4Q86W47 210 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TBC1D3Q8IZP1 549 aaPredicted RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 PIP4P2Q8N4L2 257 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 FBXL6Q8N531 539 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 CAMKK1Q8N5S9 505 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TMEM105Q8N8V8 129 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 OR13J1Q8NGT2 312 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 RLN3Q8WXF3 142 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 PEX13Q92968 403 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 HDAC10Q969S8 669 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 EID2BQ96D98 161 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 NUS1Q96E22 293 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 CERS2Q96G23 380 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 SPACA7Q96KW9 195 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TBATAQ96M53 351 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 FCRL3Q96P31 734 aaPredicted RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 FAM167BQ9BTA0 163 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TXLNGYQ9BZA5 131 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 BTBD1Q9H0C5 482 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 SUDS3Q9H7L9 328 aaPredicted RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 PLAC1Q9HBJ0 212 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 SGK2Q9HBY8 427 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 LRRC4CQ9HCJ2 640 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 ITM2CQ9NQX7 267 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 PRMT8Q9NR22 394 aaPredicted RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 RAD18Q9NS91 495 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TREX1Q9NSU2 369 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 NLE1Q9NVX2 485 aaPredicted RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 IL1RAPL1Q9NZN1 696 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 IL17CQ9P0M4 197 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 ZFATQ9P243 1243 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 EBF1Q9UH73 591 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 CD84Q9UIB8 345 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 COQ6Q9Y2Z9 468 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 GLYATL1P3A0A0U1RQE8 302 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 ZCWPW2A0A1B0GU75 182 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 EXOC1LA0A1B0GW35 172 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 A0A1W2PQU0 124 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 TCRBV9S1A1TA0A576 114 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 CCDC162PA2VCL2 907 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 RGSL1A5PLK6 1076 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 FAM86C2PA6NEL3 165 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 OR51F1A6NGY5 319 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 K7ESF4 209 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 TNFRSF10AO00220 468 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 NDUFS2O75306 463 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 TM7SF2O76062 418 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 RECQL5O94762 991 aaPredicted RBP7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 GOT2P00505 430 aaKnown RBP7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 IGLV3-19P01714 112 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 ABHD2P08910 425 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 ERVK-10P10266 1014 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 C7P10643 843 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 BPIP17213 487 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 ITGALP20701 1170 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 CD6P30203 668 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 MAT2AP31153 395 aaKnown RBP7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 MC4RP32245 332 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 ACSL1P33121 698 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 SPINT3P49223 89 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 GPX6P59796 221 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 DCDC1P59894 354 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 PPP2CBP62714 309 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 PPP2CAP67775 309 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 PTSQ03393 145 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 ACVR1Q04771 509 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 CSTF1Q05048 431 aaKnown RBP7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 MGAT5Q09328 741 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 SGCGQ13326 291 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 EFTUD2Q15029 972 aaKnown RBP eCLIP7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 UAP1Q16222 522 aaPredicted RBP7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 USP39Q53GS9 565 aaKnown RBP7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 ZRANB3Q5FWF4 1079 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 BEND6Q5SZJ8 279 aaPredicted RBP7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 ZDHHC20Q5W0Z9 365 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 PDPK2PQ6A1A2 396 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 ZNF470Q6ECI4 717 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 RFLNAQ6ZTI6 216 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 Q6ZVL8 140 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 MICALCLQ6ZW33 695 aa7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 PTAR1Q7Z6K3 402 aaPredicted RBP7.89□□□□□ -1.15
HMGA1P4-201ENST00000428643 HORMAD1Q86X24 394 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms