RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 GULP1Q9UBP9 304 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 TFR2Q9UP52 801 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 GPR34Q9UPC5 381 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 A0A0U1RQS6 177 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 PRSS38A1L453 326 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 SOWAHDA6NJG2 315 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 ZRANB2O95218 330 aaKnown RBP eCLIP16.44■□□□□ 0.22
LINC00404-201ENST00000418660 NDUFA10O95299 355 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 STC1P52823 247 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 CDK3Q00526 305 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 TCEA2Q15560 299 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 PERM1Q5SV97 790 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 RAET1GQ6H3X3 334 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 ZNF765Q7L2R6 523 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 KATNAL2Q8IYT4 538 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 RCOR2Q8IZ40 523 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 LPCAT1Q8NF37 534 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 AP2M1Q96CW1 435 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 CALR3Q96L12 384 aaKnown RBP16.44■□□□□ 0.22
LINC00404-201ENST00000418660 LYSMD1Q96S90 227 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 GOLPH3Q9H4A6 298 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 MOSPD1Q9UJG1 213 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 RAXQ9Y2V3 346 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.44■□□□□ 0.22
LINC00404-201ENST00000418660 AK5Q9Y6K8 562 aa16.44■□□□□ 0.22
LINC00404-201ENST00000418660 LRP4O75096 1905 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 GOLGA6CA6NDK9 693 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 GOLGA6BA6NDN3 693 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 ANKRD66B4E2M5 251 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 CST8O60676 142 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 IPO7O95373 1038 aaKnown RBP16.43■□□□□ 0.22
LINC00404-201ENST00000418660 CEACAM5P06731 702 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 PYGLP06737 847 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 GOLGA6DP0CG33 693 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 TGM2P21980 687 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 GPR1P46091 355 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 QPCTQ16769 361 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 OGFOD3Q6PK18 319 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 ADAMTSL4Q6UY14 1074 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 RFLNAQ6ZTI6 216 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 TAF8Q7Z7C8 310 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 NT5DC3Q86UY8 548 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 NRSN1Q8IZ57 195 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 KYQ8NBH2 561 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 WDR48Q8TAF3 677 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 IMP4Q96G21 291 aaKnown RBP16.43■□□□□ 0.22
LINC00404-201ENST00000418660 AGAP3Q96P47 875 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 MLPHQ9BV36 600 aaPredicted RBP16.43■□□□□ 0.22
LINC00404-201ENST00000418660 ADGRE3Q9BY15 652 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 CEP41Q9BYV8 373 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 FRMD8Q9BZ67 464 aaPredicted RBP16.43■□□□□ 0.22
LINC00404-201ENST00000418660 TMEM168Q9H0V1 697 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 GOLGA6AQ9NYA3 693 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 SEPT10Q9P0V9 454 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 SIRPGQ9P1W8 387 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 CD84Q9UIB8 345 aa16.43■□□□□ 0.22
LINC00404-201ENST00000418660 CSO75390 466 aaKnown RBP16.42■□□□□ 0.22
LINC00404-201ENST00000418660 CLDN7O95471 211 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 PRKD1Q15139 912 aaPredicted RBP16.42■□□□□ 0.22
LINC00404-201ENST00000418660 TEX44Q53QW1 395 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 TFDP3Q5H9I0 405 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 KAZNQ674X7 775 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 B4GALNT4Q76KP1 1039 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 DAAM2Q86T65 1068 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 FAM46DQ8NEK8 389 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 GPR156Q8NFN8 814 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 OR6C4Q8NGE1 309 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 EXD1Q8NHP7 514 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 TFB1MQ8WVM0 346 aaKnown RBP16.42■□□□□ 0.22
LINC00404-201ENST00000418660 SCAMP4Q969E2 229 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 RBM41Q96IZ5 413 aaKnown RBP16.42■□□□□ 0.22
LINC00404-201ENST00000418660 CCDC3Q9BQI4 270 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 SLC25A51Q9H1U9 297 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 CARS2Q9HA77 564 aaKnown RBP16.42■□□□□ 0.22
LINC00404-201ENST00000418660 SAE1Q9UBE0 346 aaPredicted RBP16.42■□□□□ 0.22
LINC00404-201ENST00000418660 SLC17A4Q9Y2C5 497 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 PCDHB1Q9Y5F3 818 aa16.42■□□□□ 0.22
LINC00404-201ENST00000418660 GOLGA4Q13439 2230 aaKnown RBP16.41■□□□□ 0.22
LINC00404-201ENST00000418660 hCG_1818297A0A087WSY0 165 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 RCCD1A6NED2 376 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 TCEA3O75764 348 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 SOD1P00441 154 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 FUCA1P04066 466 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 PECAM1P16284 738 aaPredicted RBP16.41■□□□□ 0.22
LINC00404-201ENST00000418660 MARCKSL1P49006 195 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 LLGL1Q15334 1064 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 SLC14A2Q15849 920 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 ISXQ2M1V0 245 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 FAM182AQ5T1J6 154 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 RAD9BQ6WBX8 426 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 CCDC50Q8IVM0 306 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 GPBAR1Q8TDU6 330 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 P3H4Q92791 437 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 TADA1Q96BN2 335 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 GRAMD1AQ96CP6 724 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 TEKT5Q96M29 485 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 TRIB3Q96RU7 358 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 GLOD4Q9HC38 313 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 TRNAU1APQ9NX07 287 aaKnown RBP16.41■□□□□ 0.22
LINC00404-201ENST00000418660 SUFUQ9UMX1 484 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms