RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SLC39A12Q504Y0 691 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 ADALQ6DHV7 355 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 LAIR1Q6GTX8 287 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 ZYG11AQ6WRX3 759 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 RHPN2Q8IUC4 686 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 SYCP3Q8IZU3 236 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 FAM185AQ8N0U4 392 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 D2HGDHQ8N465 521 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 SCAIQ8N9R8 606 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 TXNDC5Q8NBS9 432 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 FBXO15Q8NCQ5 510 aaPredicted RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 CTCFLQ8NI51 663 aaPredicted RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 LPIN2Q92539 896 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 SAAL1Q96ER3 474 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 ZNF845Q96IR2 970 aaPredicted RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 TEPSINQ96N21 525 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 PRR25Q96S07 402 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 PKP4Q99569 1192 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 CCDC106Q9BWC9 280 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 LHPPQ9H008 270 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 XPNPEP3Q9NQH7 507 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 KCND2Q9NZV8 630 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 MGAT4CQ9UBM8 478 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 NKX1-2Q9UD57 310 aaPredicted RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 FBXL17Q9UF56 701 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 LIPT1Q9Y234 373 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 VWA7Q9Y334 891 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 UBE2J1Q9Y385 318 aaPredicted RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 CYP2D7A0A087X1C5 515 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 A0A1W2PPM1 405 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 BTBD19C9JJ37 291 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CCNDBP1O95273 360 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 TFRCP02786 760 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 ZFYP08048 801 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 ABCB1P08183 1280 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 INHBAP08476 426 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 SLC2A4P14672 509 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 EPHA3P29320 983 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CASP3P42574 277 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 MTHFRP42898 656 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 PSMC4P43686 418 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 LIG4P49917 911 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 EPHB4P54760 987 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 FOXL2P58012 376 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 MRPS35P82673 323 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 SORDQ00796 357 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 HGFACQ04756 655 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 AASDHQ4L235 1098 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 PDCD4Q53EL6 469 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 ERICH6BQ5W0A0 696 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 RAB12Q6IQ22 244 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ANKRD16Q6P6B7 361 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 TMEM81Q6P7N7 255 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 DHRS13Q6UX07 377 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 TMPRSS9Q7Z410 1059 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 RABEPKQ7Z6M1 372 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 GALNT7Q86SF2 657 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 HAPLN4Q86UW8 402 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ZSWIM9Q86XI8 627 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 GSPT2Q8IYD1 628 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 CCAR2Q8N163 923 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 IL17RCQ8NAC3 791 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 MBD3L2Q8NHZ7 208 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 MYCBPAPQ8TBZ2 947 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 HSPH1Q92598 858 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ATP2A3Q93084 1043 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 FYTTD1Q96QD9 318 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 MACROD1Q9BQ69 325 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ENKD1Q9H0I2 346 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 PNNQ9H307 717 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 FBRSL1Q9HCM7 1045 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 FANCFQ9NPI8 374 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 SLC6A13Q9NSD5 602 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 SPATS2LQ9NUQ6 558 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 RLIMQ9NVW2 624 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 MORF4L1Q9UBU8 362 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 STEAP1Q9UHE8 339 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 MBD1Q9UIS9 605 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 SLC30A1Q9Y6M5 507 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 DENND4AQ7Z401 1863 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 KMT2BQ9UMN6 2715 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 RFX7Q2KHR2 1363 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 MAPK8IP3Q9UPT6 1336 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CXorf65A6NEN9 183 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 AKR1B15C9JRZ8 316 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 CCP110O43303 1012 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 HMMRO75330 724 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ELANEP08246 267 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CCNA2P20248 432 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CCR10P46092 362 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 POLGP54098 1239 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 GAB1Q13480 694 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 SLMAPQ14BN4 828 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 SPOUT1Q5T280 376 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 CDC73Q6P1J9 531 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 FAM160B2Q86V87 743 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 FBXW8Q8N3Y1 598 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 SLC44A3Q8N4M1 653 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 TRIM44Q96DX7 344 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 SPATA13Q96N96 652 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms