RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 HAUS3Q68CZ6 603 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 CFAP161Q6P656 301 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 SLC30A9Q6PML9 568 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 SLC22A25Q6T423 547 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 BRINP3Q76B58 766 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 KDELC2Q7Z4H8 507 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 TRPM1Q7Z4N2 1603 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 MYPOPQ86VE0 399 aaPredicted RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 MON1AQ86VX9 555 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 CHD1LQ86WJ1 897 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 WDR63Q8IWG1 891 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 DIS3L2Q8IYB7 885 aaKnown RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 ANKRD52Q8NB46 1076 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 SETD9Q8NE22 299 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 ZMIZ2Q8NF64 920 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 ENGASEQ8NFI3 743 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 FAM216AQ8WUB2 273 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 CNOT9Q92600 299 aaKnown RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 ADAD1Q96M93 576 aaKnown RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 NR1H4Q96RI1 486 aaPredicted RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 EYA3Q99504 573 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 WDR77Q9BQA1 342 aaPredicted RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 CHCHD6Q9BRQ6 235 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 RPAP1Q9BWH6 1393 aaPredicted RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 CADM1Q9BY67 442 aaKnown RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 CFAP74Q9C0B2 1584 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 LMAN2LQ9H0V9 348 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 ZSCAN16Q9H4T2 348 aaPredicted RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 EPHX3Q9H6B9 360 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 RBM28Q9NW13 759 aaKnown RBP2.55□□□□□ -2
HMGB3P2-201ENST00000411913 ARL15Q9NXU5 204 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 TAS2R10Q9NYW0 307 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 KCND2Q9NZV8 630 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 DISP3Q9P2K9 1392 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 HDAC6Q9UBN7 1215 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 TNFSF13BQ9Y275 285 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 KDM3AQ9Y4C1 1321 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 SMAD5-AS1Q9Y6J3 95 aa2.55□□□□□ -2
HMGB3P2-201ENST00000411913 NOS1P29475 1434 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 NUP160Q12769 1436 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 ERBINQ96RT1 1412 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 RTL1A6NKG5 1358 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 POLR3AO14802 1390 aaPredicted RBP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 PIK3R4Q99570 1358 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 ELP1O95163 1332 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 C17orf113A0A1B0GUU1 675 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 A0A1W2PQM1 296 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 OR6C68A6NDL8 312 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 ERICH4A6NGS2 130 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 K7ENM7 598 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 PER2O15055 1255 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 TNFSF14O43557 240 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 STRNO43815 780 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 KCNJ13O60928 360 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 SCGB1D1O95968 90 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 CLEC3BP05452 202 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 COX7A2P14406 83 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 DAOP14920 347 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 AZU1P20160 251 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 MX1P20591 662 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 CHMLP26374 656 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 ABCD1P33897 745 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 TNNT3P45378 269 aaPredicted RBP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 UFM1P61960 85 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 TPM4P67936 248 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 SETQ01105 290 aaPredicted RBP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 FOXD4Q12950 439 aaPredicted RBP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 TDGQ13569 410 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 SLC18A3Q16572 532 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 ZSCAN26Q16670 478 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 SLC45A4Q5BKX6 768 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 DNAJC21Q5F1R6 531 aaKnown RBP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 CCDC183Q5T5S1 534 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 ITPRIPL1Q6GPH6 555 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 NAPEPLDQ6IQ20 393 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 PLEKHA7Q6IQ23 1121 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 C17orf99Q6UX52 265 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 ATF7IPQ6VMQ6 1270 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 KRBA2Q6ZNG9 492 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 Q6ZSV7 163 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 FASTKD5Q7L8L6 764 aaKnown RBP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 ZNF367Q7RTV3 350 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 RNF144BQ7Z419 303 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 CCDC91Q7Z6B0 441 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 EXOC3L1Q86VI1 746 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 PLA2G4DQ86XP0 818 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 KLBQ86Z14 1044 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 FAM217AQ8IXS0 508 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 SCAIQ8N9R8 606 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 POC1AQ8NBT0 407 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 CCDC112Q8NEF3 446 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 KAT2AQ92830 837 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 SMARCE1Q969G3 411 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 ITFG2Q969R8 447 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 SYAP1Q96A49 352 aaPredicted RBP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 EXOC4Q96A65 974 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 FRG2BQ96QU4 278 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 USP44Q9H0E7 712 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms