RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 MIER2Q8N344 545 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 METTL25Q8N6Q8 603 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 CCDC126Q96EE4 140 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 PPM1MQ96MI6 270 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 EVLQ9UI08 416 aaPredicted RBP12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 ANK1P16157 1881 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 GNGT2O14610 69 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 CLASP2O75122 1294 aaKnown RBP12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 GMNNO75496 209 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 MAGEA12P43365 314 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 SPRYD7Q5W111 196 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 CILP2Q8IUL8 1156 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 FNDC5Q8NAU1 212 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 MTG1Q9BT17 334 aaPredicted RBP12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 TBCDQ9BTW9 1192 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 PRDM16Q9HAZ2 1276 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 USP22Q9UPT9 525 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 MYRFQ9Y2G1 1151 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 ZNF711Q9Y462 761 aa12.66□□□□□ -0.38
PPP4R1-202ENST00000400555 FFAR3O14843 346 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 GPR42O15529 346 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 PABPC4LP0CB38 370 aaKnown RBP12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 PSMA4P25789 261 aaKnown RBP12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 RGS2P41220 211 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 HNRNPDQ14103 355 aaKnown RBP12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 IKBKEQ14164 716 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 TMEM207Q6UWW9 146 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 FRA10AC1Q70Z53 315 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 SLC22A9Q8IVM8 553 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 CLYBLQ8N0X4 340 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 DLG3Q92796 817 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 EZH1Q92800 747 aaPredicted RBP12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 IL12RB2Q99665 862 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 GPR21Q99679 349 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 EGFL8Q99944 293 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 CATSPERZQ9NTU4 200 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 ANGPTL3Q9Y5C1 460 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 SMIM31A0A1B0GVY4 71 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 DHRS12A0PJE2 317 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 NPHS1O60500 1241 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 CHEK2O96017 543 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 PYGLP06737 847 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 AKR1A1P14550 325 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 PRDX3P30048 256 aaKnown RBP12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 RPS24P62847 133 aaKnown RBP12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 TUSC3Q13454 348 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 INPP5AQ14642 412 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 PARP8Q8N3A8 854 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 MTFMTQ96DP5 389 aaKnown RBP12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 HAUS8Q9BT25 410 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 HGH1Q9BTY7 390 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 CCDC90BQ9GZT6 254 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 CCSER2Q9H7U1 834 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 GALPQ9UBC7 116 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 RAD54BQ9Y620 910 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 CLOCKO15516 846 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 SYNCRIPO60506 623 aaKnown RBP12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 SERPINF2P08697 491 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 ATP6V1B2P21281 511 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 PCSK6P29122 969 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 RPL34P49207 117 aaKnown RBP12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 DUSP4Q13115 394 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 ASB9Q96DX5 294 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 FAR2Q96K12 515 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 ING2Q9H160 280 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 RAB26Q9ULW5 256 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 GIT1Q9Y2X7 761 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 DNAJC15Q9Y5T4 150 aa12.65□□□□□ -0.38
PPP4R1-202ENST00000400555 NUP214P35658 2090 aaPredicted RBP12.65□□□□□ -0.39
PPP4R1-202ENST00000400555 IQCA1LA6NCM1 817 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 ELNP15502 786 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 RPS6KA3P51812 740 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 OR4D1Q15615 310 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 MAPRE1Q15691 268 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 UNC50Q53HI1 259 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 BRMS1LQ5PSV4 323 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 CHSY3Q70JA7 882 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 ISCA2Q86U28 154 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 RETREG3Q86VR2 466 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 CLEC4FQ8N1N0 589 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 ATP6V0D2Q8N8Y2 350 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 KLHDC9Q8NEP7 349 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 OR4L1Q8NH43 312 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 NCLNQ969V3 563 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 FBXL20Q96IG2 436 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 MUC3BQ9H195 1237 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 RRAGCQ9HB90 399 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 WARS2Q9UGM6 360 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 PSME4Q14997 1843 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 A0A1B0GTL3 188 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 SOCS2O14508 198 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 NIPSNAP2O75323 286 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 CDK14O94921 469 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 CTPS1P17812 591 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 RPL17P18621 184 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 RPL9P32969 192 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 XIAPP98170 497 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 ACAP2Q15057 778 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms