RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 IMP4Q96G21 291 aaKnown RBP30.71■■■□□ 2.51
CMTM4-202ENST00000394106 USP29Q9HBJ7 922 aa30.71■■■□□ 2.51
CMTM4-202ENST00000394106 PHPT1Q9NRX4 125 aaPredicted RBP30.71■■■□□ 2.51
CMTM4-202ENST00000394106 DNPEPQ9ULA0 475 aa30.71■■■□□ 2.51
CMTM4-202ENST00000394106 PCDHA3Q9Y5H8 950 aa30.71■■■□□ 2.51
CMTM4-202ENST00000394106 MYCLP1P12525 358 aaPredicted RBP30.7■■■□□ 2.51
CMTM4-202ENST00000394106 PTPN3P26045 913 aa30.7■■■□□ 2.51
CMTM4-202ENST00000394106 PTSQ03393 145 aa30.7■■■□□ 2.51
CMTM4-202ENST00000394106 GALNT3Q14435 633 aa30.7■■■□□ 2.51
CMTM4-202ENST00000394106 PPP2R5EQ16537 467 aa30.7■■■□□ 2.51
CMTM4-202ENST00000394106 TEX44Q53QW1 395 aa30.7■■■□□ 2.51
CMTM4-202ENST00000394106 KDF1Q8NAX2 398 aaPredicted RBP30.7■■■□□ 2.51
CMTM4-202ENST00000394106 ADGRE3Q9BY15 652 aa30.7■■■□□ 2.51
CMTM4-202ENST00000394106 SLC25A51Q9H1U9 297 aa30.7■■■□□ 2.51
CMTM4-202ENST00000394106 GLOD4Q9HC38 313 aa30.7■■■□□ 2.51
CMTM4-202ENST00000394106 NCKIPSDQ9NZQ3 722 aa30.7■■■□□ 2.51
CMTM4-202ENST00000394106 MACROD2A1Z1Q3 448 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 CPED1A4D0V7 1026 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 GRID2IPA4D2P6 1211 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 PDE2AO00408 941 aaPredicted RBP30.69■■■□□ 2.5
CMTM4-202ENST00000394106 CLDN7O95471 211 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 E2F1Q01094 437 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 NR0B2Q15466 257 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 PCSK7Q16549 785 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 QPCTQ16769 361 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 C6orf132Q5T0Z8 1188 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 CCDC181Q5TID7 509 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 IFI44Q8TCB0 444 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 GLMNQ92990 594 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 AP2M1Q96CW1 435 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 MLPHQ9BV36 600 aaPredicted RBP30.69■■■□□ 2.5
CMTM4-202ENST00000394106 BOCQ9BWV1 1114 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 TEX101Q9BY14 249 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 ABCG8Q9H221 673 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 CYP4F12Q9HCS2 524 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 TRIM10Q9UDY6 481 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 DGKBQ9Y6T7 804 aa30.69■■■□□ 2.5
CMTM4-202ENST00000394106 GOLGA4Q13439 2230 aaKnown RBP30.69■■■□□ 2.5
CMTM4-202ENST00000394106 C1orf232A0A0U1RR37 186 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 ANKRD66B4E2M5 251 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 CTNNA2P26232 953 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 GPR1P46091 355 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 STC1P52823 247 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 INSM1Q01101 510 aaPredicted RBP30.68■■■□□ 2.5
CMTM4-202ENST00000394106 KIF5AQ12840 1032 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 BBS12Q6ZW61 710 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 GKN2Q86XP6 184 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 TXLNBQ8N3L3 684 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 LRRC57Q8N9N7 239 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 SPATA22Q8NHS9 363 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 SCG3Q8WXD2 468 aaKnown RBP30.68■■■□□ 2.5
CMTM4-202ENST00000394106 SUDS3Q9H7L9 328 aaPredicted RBP30.68■■■□□ 2.5
CMTM4-202ENST00000394106 SIRPGQ9P1W8 387 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 ZMIZ1Q9ULJ6 1067 aa30.68■■■□□ 2.5
CMTM4-202ENST00000394106 A0A0U1RQJ8 604 aa30.67■■■□□ 2.5
CMTM4-202ENST00000394106 CCDC66A2RUB6 948 aa30.67■■■□□ 2.5
CMTM4-202ENST00000394106 TNFRSF10CO14798 259 aa30.67■■■□□ 2.5
CMTM4-202ENST00000394106 COPS2P61201 443 aa30.67■■■□□ 2.5
CMTM4-202ENST00000394106 CDK3Q00526 305 aa30.67■■■□□ 2.5
CMTM4-202ENST00000394106 DPTQ07507 201 aa30.67■■■□□ 2.5
CMTM4-202ENST00000394106 GUSBP11Q6P575 273 aa30.67■■■□□ 2.5
CMTM4-202ENST00000394106 SLC35F3Q8IY50 421 aa30.67■■■□□ 2.5
CMTM4-202ENST00000394106 SCAMP4Q969E2 229 aa30.67■■■□□ 2.5
CMTM4-202ENST00000394106 TEKT5Q96M29 485 aa30.67■■■□□ 2.5
CMTM4-202ENST00000394106 PRSS38A1L453 326 aa30.66■■■□□ 2.5
CMTM4-202ENST00000394106 MT-CYBP00156 380 aaPredicted RBP30.66■■■□□ 2.5
CMTM4-202ENST00000394106 RPIAP49247 311 aa30.66■■■□□ 2.5
CMTM4-202ENST00000394106 RWDD2BP57060 319 aa30.66■■■□□ 2.5
CMTM4-202ENST00000394106 WASHC5Q12768 1159 aa30.66■■■□□ 2.5
CMTM4-202ENST00000394106 TARDBPQ13148 414 aaKnown RBP eCLIP30.66■■■□□ 2.59e-8■■■■■ 28.7
CMTM4-202ENST00000394106 EFL1Q7Z2Z2 1120 aaKnown RBP30.66■■■□□ 2.5
CMTM4-202ENST00000394106 QKIQ96PU8 341 aaKnown RBP eCLIP30.66■■■□□ 2.5
CMTM4-202ENST00000394106 LYSMD1Q96S90 227 aa30.66■■■□□ 2.5
CMTM4-202ENST00000394106 GULP1Q9UBP9 304 aa30.66■■■□□ 2.5
CMTM4-202ENST00000394106 TRABD2BA6NFA1 517 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 MTSS1O43312 755 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 OPA1O60313 960 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 GP1BAP07359 652 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 CAMK2BQ13554 666 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 LVRNQ6Q4G3 990 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 TRIB3Q96RU7 358 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 HERPUD2Q9BSE4 406 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 RIOK2Q9BVS4 552 aaKnown RBP30.65■■■□□ 2.5
CMTM4-202ENST00000394106 ABCG4Q9H172 646 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 UBP1Q9NZI7 540 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 KLHL8Q9P2G9 620 aaPredicted RBP30.65■■■□□ 2.5
CMTM4-202ENST00000394106 AMFRQ9UKV5 643 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 GPR34Q9UPC5 381 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 CLCA2Q9UQC9 943 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 MYLKQ15746 1914 aa30.65■■■□□ 2.5
CMTM4-202ENST00000394106 EPG5Q9HCE0 2579 aa30.64■■■□□ 2.5
CMTM4-202ENST00000394106 APOC4-APOC2K7ER74 178 aa30.64■■■□□ 2.5
CMTM4-202ENST00000394106 PMPCBO75439 489 aa30.64■■■□□ 2.5
CMTM4-202ENST00000394106 APOC2P02655 101 aa30.64■■■□□ 2.5
CMTM4-202ENST00000394106 TEAD1P28347 426 aa30.64■■■□□ 2.5
CMTM4-202ENST00000394106 CDK18Q07002 472 aa30.64■■■□□ 2.5
CMTM4-202ENST00000394106 DOK6Q6PKX4 331 aa30.64■■■□□ 2.5
CMTM4-202ENST00000394106 ZNF765Q7L2R6 523 aa30.64■■■□□ 2.5
CMTM4-202ENST00000394106 PEX26Q7Z412 305 aa30.64■■■□□ 2.5
CMTM4-202ENST00000394106 TAF8Q7Z7C8 310 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms