RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 COPZ1P61923 177 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 LPCAT1Q8NF37 534 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 POLR1EQ9GZS1 481 aaKnown RBP19.7■□□□□ 0.74
SHANK1-203ENST00000391813 TKTL2Q9H0I9 626 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 TRPC4Q9UBN4 977 aa19.7■□□□□ 0.74
SHANK1-203ENST00000391813 SSNA1O43805 119 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 RHOCP08134 193 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 MTHFRP42898 656 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 MED22Q15528 200 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 PRAMEF19Q5SWL8 479 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 GLT6D1Q7Z4J2 308 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 TMEM126BQ8IUX1 230 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 UNC5BQ8IZJ1 945 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 NXNL1Q96CM4 212 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 P2RY11Q96G91 374 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 FAXDC2Q96IV6 333 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 ADGRE2Q9UHX3 823 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 ZNF222Q9UK12 451 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 NOCTQ9UK39 431 aaKnown RBP19.69■□□□□ 0.74
SHANK1-203ENST00000391813 SNX6Q9UNH7 406 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 BTRCQ9Y297 605 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 A0A0G2JLL6 359 aaPredicted RBP19.69■□□□□ 0.74
SHANK1-203ENST00000391813 SMIM22K7EJ46 135 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 IFRD1O00458 451 aaPredicted RBP19.69■□□□□ 0.74
SHANK1-203ENST00000391813 OTCP00480 354 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 FGFR1P11362 822 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 AOC1P19801 751 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 RHOAP61586 193 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 TNFAIP8L3Q5GJ75 292 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 ZCCHC8Q6NZY4 707 aaKnown RBP19.69■□□□□ 0.74
SHANK1-203ENST00000391813 PRRT2Q7Z6L0 340 aaPredicted RBP19.69■□□□□ 0.74
SHANK1-203ENST00000391813 REPS1Q96D71 796 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 SMARCD1Q96GM5 515 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 SMAD5Q99717 465 aaKnown RBP19.69■□□□□ 0.74
SHANK1-203ENST00000391813 PEAK1Q9H792 1746 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 AQP12BA6NM10 295 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 NDUFS2O75306 463 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 LRCH4O75427 683 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 MAFO75444 373 aaPredicted RBP19.69■□□□□ 0.74
SHANK1-203ENST00000391813 ATXN8OSP0DMR3 200 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 DGKAP23743 735 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 GRK3P35626 688 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 NDUFAF6Q330K2 333 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 GPR180Q86V85 440 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 AQP12AQ8IXF9 295 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 SMYD1Q8NB12 490 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 PPTC7Q8NI37 304 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 ZNF671Q8TAW3 534 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 COPS5Q92905 334 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 IGSF9Q9P2J2 1179 aa19.69■□□□□ 0.74
SHANK1-203ENST00000391813 PABPC4LP0CB38 370 aaKnown RBP19.68■□□□□ 0.74
SHANK1-203ENST00000391813 PPIBP23284 216 aaKnown RBP19.68■□□□□ 0.74
SHANK1-203ENST00000391813 CLCN2P51788 898 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 ABATP80404 500 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 DLG1Q12959 904 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 JOSD2Q8TAC2 188 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 CRISPLD1Q9H336 500 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 FBXO44Q9H4M3 255 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 CNTNAP2Q9UHC6 1331 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 SLC22A1O15245 554 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 FADS2O95864 444 aaKnown RBP19.68■□□□□ 0.74
SHANK1-203ENST00000391813 EFEMP1Q12805 493 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 MERTKQ12866 999 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 PPM1LQ5SGD2 360 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.68■□□□□ 0.74
SHANK1-203ENST00000391813 TOP1MTQ969P6 601 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 DEFB118Q96PH6 123 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 SLITRK2Q9H156 845 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 SDCBP2Q9H190 292 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 COL1A2P08123 1366 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 CASTOR2A6NHX0 329 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 XYLBO75191 536 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 POMCP01189 267 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 TUFMP49411 452 aaKnown RBP19.68■□□□□ 0.74
SHANK1-203ENST00000391813 CTBP1Q13363 440 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 IL18R1Q13478 541 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 MOGQ16653 247 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 REP15Q6BDI9 236 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 FAM131AQ6UXB0 335 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 SVOPLQ8N434 492 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 CDYL2Q8N8U2 506 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 UROC1Q96N76 676 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 CAB39LQ9H9S4 337 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 DHX15O43143 795 aaKnown RBP19.68■□□□□ 0.74
SHANK1-203ENST00000391813 IGFBP5P24593 272 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 AKR1D1P51857 326 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 NIPAL1Q6NVV3 410 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 ADAMTSL2Q86TH1 951 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 PLD5Q8N7P1 536 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 ZNF781Q8N8C0 355 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 PHF10Q8WUB8 498 aaKnown RBP19.68■□□□□ 0.74
SHANK1-203ENST00000391813 CD101Q93033 1021 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 ST6GALNAC4Q9H4F1 302 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 CMTM6Q9NX76 183 aa19.68■□□□□ 0.74
SHANK1-203ENST00000391813 SLC12A8A0AV02 714 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 DUSP11O75319 330 aaKnown RBP19.67■□□□□ 0.74
SHANK1-203ENST00000391813 IRF1P10914 325 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 GOT1P17174 413 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 TIE1P35590 1138 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 CSNK2BP67870 215 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms