RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 HOXD10P28358 340 aa19.8■□□□□ 0.76
COL15A1-201ENST00000375001 ATN1P54259 1190 aaPredicted RBP19.8■□□□□ 0.76
COL15A1-201ENST00000375001 CTBP1Q13363 440 aa19.8■□□□□ 0.76
COL15A1-201ENST00000375001 DLG2Q15700 870 aa19.8■□□□□ 0.76
COL15A1-201ENST00000375001 SLC1A5Q15758 541 aa19.8■□□□□ 0.76
COL15A1-201ENST00000375001 GNASQ5JWF2 1037 aa19.8■□□□□ 0.76
COL15A1-201ENST00000375001 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.8■□□□□ 0.76
COL15A1-201ENST00000375001 RALGPS2Q86X27 583 aaPredicted RBP19.8■□□□□ 0.76
COL15A1-201ENST00000375001 SLC2A14Q8TDB8 520 aa19.8■□□□□ 0.76
COL15A1-201ENST00000375001 LRTOMTQ8WZ04 291 aa19.8■□□□□ 0.76
COL15A1-201ENST00000375001 RBM4BQ9BQ04 359 aaKnown RBP19.8■□□□□ 0.76
COL15A1-201ENST00000375001 RBM4Q9BWF3 364 aaKnown RBP19.8■□□□□ 0.76
COL15A1-201ENST00000375001 FSCN2O14926 492 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 PCDH8O95206 1070 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 APOC1P02654 83 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 CYP3A4P08684 503 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 BUD31P41223 144 aaPredicted RBP19.79■□□□□ 0.76
COL15A1-201ENST00000375001 TUBA3CQ13748 450 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 GRIK5Q16478 980 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 LY6KQ17RY6 165 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.79■□□□□ 0.76
COL15A1-201ENST00000375001 TUBGCP5Q96RT8 1024 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 ABCG2Q9UNQ0 655 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 C4orf32Q8N8J7 132 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 CHIAQ9BZP6 476 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 MAGEE1Q9HCI5 957 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 POLR3HQ9Y535 204 aaPredicted RBP19.79■□□□□ 0.76
COL15A1-201ENST00000375001 H7C4K7 107 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 CCNYL3P0C7X3 344 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 TUBA1BP68363 451 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 ELP6Q0PNE2 266 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 TUBA1AQ71U36 451 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 TRAPPC12Q8WVT3 735 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 CEP295NLQ96MC4 621 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 NFKBIZQ9BYH8 718 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 TRAF6Q9Y4K3 522 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 C17orf102A2RUQ5 167 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 CASTOR2A6NHX0 329 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 PAEPP09466 180 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 PDCD4Q53EL6 469 aaKnown RBP19.79■□□□□ 0.76
COL15A1-201ENST00000375001 RD3Q7Z3Z2 195 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 SHC3Q92529 594 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 BBIP1A8MTZ0 92 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 LACTBL1A8MY62 500 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 PSMD10O75832 226 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 AQP1P29972 269 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 PTCD2Q8WV60 388 aaKnown RBP19.79■□□□□ 0.76
COL15A1-201ENST00000375001 ART5Q96L15 291 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 FEM1AQ9BSK4 669 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 POLR1EQ9GZS1 481 aaKnown RBP19.79■□□□□ 0.76
COL15A1-201ENST00000375001 AASDHPPTQ9NRN7 309 aa19.79■□□□□ 0.76
COL15A1-201ENST00000375001 MEIS2O14770 477 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 RNASEH1O60930 286 aaKnown RBP19.78■□□□□ 0.76
COL15A1-201ENST00000375001 PTPN1P18031 435 aaKnown RBP19.78■□□□□ 0.76
COL15A1-201ENST00000375001 SLC6A2P23975 617 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 CPSF6Q16630 551 aaKnown RBP eCLIP19.78■□□□□ 0.76
COL15A1-201ENST00000375001 METTL7BQ6UX53 244 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 PPM1MQ96MI6 270 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 ZCCHC2Q9C0B9 1178 aaKnown RBP19.78■□□□□ 0.76
COL15A1-201ENST00000375001 CATP04040 527 aaKnown RBP19.78■□□□□ 0.76
COL15A1-201ENST00000375001 PPIL2Q13356 520 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 HGSNATQ68CP4 663 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 RASSF5Q8WWW0 418 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 PIK3R3Q92569 461 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 ERMAPQ96PL5 475 aaPredicted RBP19.78■□□□□ 0.76
COL15A1-201ENST00000375001 TEFMQ96QE5 360 aaKnown RBP19.78■□□□□ 0.76
COL15A1-201ENST00000375001 IKZF4Q9H2S9 585 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 SALL4Q9UJQ4 1053 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 ST3GAL5Q9UNP4 418 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 SAMD4AQ9UPU9 718 aaKnown RBP19.78■□□□□ 0.76
COL15A1-201ENST00000375001 THPOP40225 353 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 TAS2R40P59535 323 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 RPL7AP62424 266 aaKnown RBP19.78■□□□□ 0.76
COL15A1-201ENST00000375001 SEMA5AQ13591 1074 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 PPM1LQ5SGD2 360 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 CUZD1Q86UP6 607 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 CD101Q93033 1021 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 FGFBP2Q9BYJ0 223 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 PPIEQ9UNP9 301 aaKnown RBP19.78■□□□□ 0.76
COL15A1-201ENST00000375001 AGPSO00116 658 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 CD86P42081 329 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 PEX6Q13608 980 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 PHC2Q8IXK0 858 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 GALNT6Q8NCL4 622 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 TNFRSF25Q93038 417 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 RAD51AP1Q96B01 352 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 FCRL4Q96PJ5 515 aa19.78■□□□□ 0.76
COL15A1-201ENST00000375001 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.78■□□□□ 0.76
COL15A1-201ENST00000375001 CABYRO75952 493 aa19.77■□□□□ 0.76
COL15A1-201ENST00000375001 FUT2Q10981 343 aa19.77■□□□□ 0.76
COL15A1-201ENST00000375001 LGI2Q8N0V4 545 aa19.77■□□□□ 0.76
COL15A1-201ENST00000375001 CLHC1Q8NHS4 586 aa19.77■□□□□ 0.76
COL15A1-201ENST00000375001 TMCO6Q96DC7 493 aa19.77■□□□□ 0.76
COL15A1-201ENST00000375001 CNPPD1Q9BV87 410 aa19.77■□□□□ 0.76
COL15A1-201ENST00000375001 CADM1Q9BY67 442 aaKnown RBP19.77■□□□□ 0.76
COL15A1-201ENST00000375001 ACSS2Q9NR19 701 aa19.77■□□□□ 0.76
COL15A1-201ENST00000375001 GNB5O14775 395 aa19.77■□□□□ 0.76
COL15A1-201ENST00000375001 ACOX1Q15067 660 aa19.77■□□□□ 0.76
COL15A1-201ENST00000375001 ZPBP2Q6X784 338 aa19.77■□□□□ 0.76
COL15A1-201ENST00000375001 NIPA1Q7RTP0 329 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms