RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 SLC22A17Q8WUG5 538 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 METTL21AQ8WXB1 218 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 FAM168AQ92567 244 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 PRCCQ92733 491 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 INPP5DQ92835 1189 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 MR1Q95460 341 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 RGMAQ96B86 450 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 DTNBP1Q96EV8 351 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 C14orf79Q96F83 325 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 INTS4Q96HW7 963 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 COQ7Q99807 217 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 ERP44Q9BS26 406 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 TTC12Q9H892 705 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 MLXIPQ9HAP2 919 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 TMEM165Q9HC07 324 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 ARHGEF3Q9NR81 526 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 EMC3Q9P0I2 261 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 IGSF9Q9P2J2 1179 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 MBD2Q9UBB5 411 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 MAD2L2Q9UI95 211 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 ATPIF1Q9UII2 106 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 RAB23Q9ULC3 237 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 AGAP1Q9UPQ3 857 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 CFAP20Q9Y6A4 193 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 FPGT-TNNI3KV9GXZ4 949 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 AHCTF1Q8WYP5 2266 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 SPAARA0A1B0GVQ0 90 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 OR6C74A6NCV1 312 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 SLC9B1P1A6NJY1 282 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 H0Y8G0 127 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 IFIT3O14879 490 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ATP2A1O14983 1001 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 NVLO15381 856 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 NIPSNAP2O75323 286 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 LARGE1O95461 756 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 FTLP02792 175 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ANXA2P07355 339 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 INHBAP08476 426 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ENO2P09104 434 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PRKAR1AP10644 381 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 MYL4P12829 197 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CASTP20810 708 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CD40P25942 277 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CORO1AP31146 461 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CCR1P32246 355 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PPARGP37231 505 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PITPNBP48739 271 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 MAPKAPK2P49137 400 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 FNTBP49356 437 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 MAP2K6P52564 334 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PRRX1P54821 245 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CASP9P55211 416 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 NPEPPSP55786 919 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 BCAR1P56945 870 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 RPS3AP61247 264 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 TRA2BP62995 288 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 MVKQ03426 396 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PLD1Q13393 1074 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 LSAMPQ13449 338 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 THOC5Q13769 683 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 KIZQ2M2Z5 673 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 SLC5A9Q2M3M2 681 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ZNF528Q3MIS6 628 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 RIPPLY2Q5TAB7 128 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 HEPHL1Q6MZM0 1159 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ERICH5Q6P6B1 374 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CCDC62Q6P9F0 684 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 MARK2Q7KZI7 788 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 LRRC8DQ7L1W4 858 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 MARCH9Q86YJ5 346 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CNTN4Q8IWV2 1026 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ARFGAP2Q8N6H7 521 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 C12orf76Q8N812 135 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 RCBTB1Q8NDN9 531 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 HIPK4Q8NE63 616 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 DEFB124Q8NES8 71 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 OR6J1Q8NGC5 347 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 OR52M1Q8NGK5 317 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PCDH19Q8TAB3 1148 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 URGCPQ8TCY9 931 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ATP8B4Q8TF62 1192 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 THRSPQ92748 146 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 INTS12Q96CB8 462 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 RAX2Q96IS3 184 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 FER1L6-AS2Q96M78 137 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CDK5RAP1Q96SZ6 601 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 RBM15Q96T37 977 aaKnown RBP eCLIP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 MLPHQ9BV36 600 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 BOCQ9BWV1 1114 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CRNKL1Q9BZJ0 848 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 SPATC1LQ9H0A9 340 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 QRSL1Q9H0R6 528 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 SARS2Q9NP81 518 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 TNFRSF12AQ9NP84 129 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 GIMAP4Q9NUV9 329 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 RAB20Q9NX57 234 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.56□□□□□ -1.843e-6■■■■□ 21.3
ECHDC1-205ENST00000368295 CFAP97Q9P2B7 532 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 GULP1Q9UBP9 304 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms