RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 HOXC8P31273 242 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 DIO3P55073 304 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 POLD3Q15054 466 aaPredicted RBP20.44■□□□□ 0.86
COL13A1-202ENST00000357811 RPS6KA2Q15349 733 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 TRIML2Q8N7C3 387 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 CCT7Q99832 543 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 MRM3Q9HC36 420 aaKnown RBP20.44■□□□□ 0.86
COL13A1-202ENST00000357811 POLR3BQ9NW08 1133 aaPredicted RBP20.44■□□□□ 0.86
COL13A1-202ENST00000357811 SUCOQ9UBS9 1254 aaKnown RBP20.44■□□□□ 0.86
COL13A1-202ENST00000357811 GNAO1P09471 354 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 CAPN3P20807 821 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 ARL1P40616 181 aaPredicted RBP20.44■□□□□ 0.86
COL13A1-202ENST00000357811 HUNKP57058 714 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 PLA2G4EQ3MJ16 856 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 NUP93Q8N1F7 819 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 DNAJB14Q8TBM8 379 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 CCDC126Q96EE4 140 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 HBEGFQ99075 208 aa20.44■□□□□ 0.86
COL13A1-202ENST00000357811 UTP6Q9NYH9 597 aaKnown RBP20.44■□□□□ 0.86
COL13A1-202ENST00000357811 A0A0D9SEW6 157 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 A0A0U1RQF3 1178 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 M0QZQ0 153 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 SCAMP3O14828 347 aaKnown RBP20.43■□□□□ 0.86
COL13A1-202ENST00000357811 CD3EAPO15446 510 aaKnown RBP20.43■□□□□ 0.86
COL13A1-202ENST00000357811 GLP2RO95838 553 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 PRDX3P30048 256 aaKnown RBP20.43■□□□□ 0.86
COL13A1-202ENST00000357811 FMO4P31512 558 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 CDKN1CP49918 316 aaPredicted RBP20.43■□□□□ 0.86
COL13A1-202ENST00000357811 DYNC1I2Q13409 638 aaKnown RBP20.43■□□□□ 0.86
COL13A1-202ENST00000357811 LPIN1Q14693 890 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 MAPRE2Q15555 327 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 AFMIDQ63HM1 303 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 SERINC5Q86VE9 423 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 ARRDC2Q8TBH0 407 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 TWIST2Q8WVJ9 160 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 VPS45Q9NRW7 570 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 SLC12A8A0AV02 714 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 SUPT3HB4E1H0 165 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 NME4O00746 187 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 AP1G1O43747 822 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 SUPT3HO75486 399 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 CYP11A1P05108 521 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 ATXN1LP0C7T5 689 aaKnown RBP20.43■□□□□ 0.86
COL13A1-202ENST00000357811 MTHFD1P11586 935 aaKnown RBP20.43■□□□□ 0.86
COL13A1-202ENST00000357811 HGFP14210 728 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 CTGFP29279 349 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 POLD2P49005 469 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 PLIN5Q00G26 463 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 MAP7Q14244 749 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 NUDT8Q8WV74 236 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 SPON2Q9BUD6 331 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 MAP10Q9P2G4 905 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 IKZF3Q9UKT9 509 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 ENPP3O14638 875 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 RAMP2O60895 175 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 CD1DP15813 335 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 NCK1P16333 377 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 RGS2P41220 211 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 HERVK_113P63132 956 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 SLC22A9Q8IVM8 553 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 AHI1Q8N157 1196 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 ERVK-6Q9BXR3 956 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 ARHGAP39Q9C0H5 1083 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 TUBB1Q9H4B7 451 aa20.43■□□□□ 0.86
COL13A1-202ENST00000357811 ARHGAP10A1A4S6 786 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 BAIAP3O94812 1187 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 AGTR2P50052 363 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 TIAL1Q01085 375 aaKnown RBP eCLIP20.42■□□□□ 0.86
COL13A1-202ENST00000357811 MAPRE1Q15691 268 aaKnown RBP20.42■□□□□ 0.86
COL13A1-202ENST00000357811 FAM47BQ8NA70 645 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 TSPAN14Q8NG11 270 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 FAR2Q96K12 515 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 SUSD3Q96L08 255 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 RANBP9Q96S59 729 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 MRPS26Q9BYN8 205 aaKnown RBP20.42■□□□□ 0.86
COL13A1-202ENST00000357811 GALPQ9UBC7 116 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 IQCA1LA6NCM1 817 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 CRCPO75575 148 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 ZNF235Q14590 738 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 UGT3A2Q3SY77 523 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 SAMD4BQ5PRF9 694 aaKnown RBP20.42■□□□□ 0.86
COL13A1-202ENST00000357811 PAQR3Q6TCH7 311 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 UMODL1-AS1Q8N2C9 162 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 C1orf50Q9BV19 199 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 TRIM62Q9BVG3 475 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 MFSD1Q9H3U5 465 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 CD300AQ9UGN4 299 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 USP22Q9UPT9 525 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 TLR6Q9Y2C9 796 aa20.42■□□□□ 0.86
COL13A1-202ENST00000357811 MROH6A6NGR9 719 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 UNCXA6NJT0 531 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 GPR39O43194 453 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 SLC7A4O43246 635 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 GPX3P22352 226 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 PBX3P40426 434 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 INHBCP55103 352 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 RABL3Q5HYI8 236 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 TBCELQ5QJ74 424 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 MON1AQ86VX9 555 aa20.41■□□□□ 0.86
COL13A1-202ENST00000357811 TEX37Q96LM6 180 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms