RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 CCDC162PA2VCL2 907 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 F5H5T6 163 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 CKBP12277 381 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 ZNF37AP17032 561 aaPredicted RBP15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 ETFBP38117 255 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 RPL5P46777 297 aaKnown RBP15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 KCNC1P48547 511 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 STC1P52823 247 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 CREB5Q02930 508 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 TAF10Q12962 218 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 COQ5Q5HYK3 327 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 C1QTNF12Q5T7M4 302 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 ZNF549Q6P9A3 640 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 PAOXQ6QHF9 649 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 EFL1Q7Z2Z2 1120 aaKnown RBP15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 MIB1Q86YT6 1006 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 STAG3L4Q8TBR4 150 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 BLOC1S5Q8TDH9 187 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 DDI1Q8WTU0 396 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 ZUFSPQ96AP4 578 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 PTERQ96BW5 349 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 DNAJC1Q96KC8 554 aaKnown RBP15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 MRPS26Q9BYN8 205 aaKnown RBP15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 PDFQ9HBH1 243 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 PFDN4Q9NQP4 134 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 NLE1Q9NVX2 485 aaPredicted RBP15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 GABRQQ9UN88 632 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 CRYL1Q9Y2S2 319 aa15.46■□□□□ 0.07
TNFSF13-202ENST00000349228 AZIN1O14977 448 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 PFDN6O15212 129 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 ZDHHC11BP0C7U3 371 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 GPX3P22352 226 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 MSX2P35548 267 aaPredicted RBP15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 GRIK2Q13002 908 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 GPR17Q13304 367 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 PPP1R3AQ16821 1122 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 MAP7D1Q3KQU3 841 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 RNF180Q86T96 592 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 LDB1Q86U70 411 aaPredicted RBP15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 PTGR2Q8N8N7 351 aaPredicted RBP15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 ATAD1Q8NBU5 361 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 LPGAT1Q92604 370 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 KIAA1191Q96A73 305 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 MGME1Q9BQP7 344 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 TRIM15Q9C019 465 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 DERL2Q9GZP9 239 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 ELAC1Q9H777 363 aaKnown RBP15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 POLR3BQ9NW08 1133 aaPredicted RBP15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 TMEM161AQ9NX61 479 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 PRG3Q9Y2Y8 225 aaPredicted RBP15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 KCTD3Q9Y597 815 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 MRPL42Q9Y6G3 142 aaKnown RBP15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 MYLKQ15746 1914 aa15.45■□□□□ 0.06
TNFSF13-202ENST00000349228 OR51F1A6NGY5 319 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 SYCE1LA8MT33 242 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 H7C4K7 107 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 KERAO60938 352 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 RNASEH2AO75792 299 aaKnown RBP15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 MATN4O95460 622 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 TBX18O95935 607 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 CD9P21926 228 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 FGFR3P22607 806 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 MRPL19P49406 292 aaKnown RBP15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 TIAL1Q01085 375 aaKnown RBP eCLIP15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 ELAVL2Q12926 359 aaKnown RBP15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 KANK2Q63ZY3 851 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 AFTPHQ6ULP2 937 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 SAPCD2Q86UD0 394 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 OR52K2Q8NGK3 314 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 DGCR14Q96DF8 476 aaKnown RBP15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 CDKN2AIPNLQ96HQ2 116 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 TRIB3Q96RU7 358 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 ATOH8Q96SQ7 321 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 AKTIPQ9H8T0 292 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 TAS2R13Q9NYV9 303 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 ARL5AQ9Y689 179 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 UTRNP46939 3433 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 MYO16Q9Y6X6 1858 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 LCHNA4D1U4 455 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 CDK14O94921 469 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 SLC4A1P02730 911 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 FAM58BPP0C7Q3 252 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 TCN1P20061 433 aaPredicted RBP15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 ACVRL1P37023 503 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 TM4SF4P48230 202 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 SH3BP2P78314 561 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 RAD51Q06609 339 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 FOXM1Q08050 763 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 USP41Q3LFD5 358 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 MGAT5BQ3V5L5 792 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 FAM171A1Q5VUB5 890 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 IL23RQ5VWK5 629 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 CLEC6AQ6EIG7 209 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 CYHR1Q6ZMK1 362 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 SPATA19Q7Z5L4 167 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 PIM3Q86V86 326 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 MIER2Q8N344 545 aa15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 NKAPQ8N5F7 415 aaKnown RBP15.44■□□□□ 0.06
TNFSF13-202ENST00000349228 MINDY1Q8N5J2 469 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms