RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 TFAP2BQ92481 460 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 BEX2Q9BXY8 128 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 MKS1Q9NXB0 559 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 RNF112Q9ULX5 631 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 MLNP12872 115 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 ABATP80404 500 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 RBP5P82980 135 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 TBRG1Q3YBR2 411 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 KRT73Q86Y46 540 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 TAGAPQ8N103 731 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 ATPAF2Q8N5M1 289 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 ANKFN1Q8N957 763 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 RHOJQ9H4E5 214 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 CCNB1IP1Q9NPC3 277 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 VPS4AQ9UN37 437 aa16.62■□□□□ 0.25
PACS1-201ENST00000320580 HACD1B0YJ81 288 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 NBNO60934 754 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 UMPSP11172 480 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 ADORA2AP29274 412 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 ZNF517Q6ZMY9 492 aaPredicted RBP16.61■□□□□ 0.25
PACS1-201ENST00000320580 VASH1Q7L8A9 365 aaPredicted RBP16.61■□□□□ 0.25
PACS1-201ENST00000320580 LRRC71Q8N4P6 559 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 PIK3R3Q92569 461 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 P2RY11Q96G91 374 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 PHOX2BQ99453 314 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 ZNF670Q9BS34 389 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 EMILIN2Q9BXX0 1053 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 BAZ2AQ9UIF9 1905 aaKnown RBP16.61■□□□□ 0.25
PACS1-201ENST00000320580 CST3P01034 146 aaPredicted RBP16.61■□□□□ 0.25
PACS1-201ENST00000320580 GOT1P17174 413 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 ACO1P21399 889 aaKnown RBP16.61■□□□□ 0.25
PACS1-201ENST00000320580 HTR2BP41595 481 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 PLA2G16P53816 162 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 ENPEPQ07075 957 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 NPTX1Q15818 432 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 PFKFB4Q16877 469 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 TIMM50Q3ZCQ8 353 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 COLGALT2Q8IYK4 626 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 C2orf40Q9H1Z8 148 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 ZNF408Q9H9D4 720 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 SEMA4BQ9NPR2 832 aaPredicted RBP16.61■□□□□ 0.25
PACS1-201ENST00000320580 CSADQ9Y600 493 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 DOT1LQ8TEK3 1739 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 MATN1P21941 496 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 DCKP27707 260 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 MAPK12P53778 367 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 UGCGQ16739 394 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 ZNF404Q494X3 552 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 ZC3H12BQ5HYM0 836 aaKnown RBP16.61■□□□□ 0.25
PACS1-201ENST00000320580 BRSK2Q8IWQ3 736 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 CLYBLQ8N0X4 340 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 C19orf60Q96EN9 201 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 OGDHLQ9ULD0 1010 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 CORINQ9Y5Q5 1042 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 ASS1P00966 412 aaKnown RBP16.61■□□□□ 0.25
PACS1-201ENST00000320580 FMO4P31512 558 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 LRP8Q14114 963 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 ATF7IP2Q5U623 682 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 ERAP2Q6P179 960 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 LZTR1Q8N653 840 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 PTGR2Q8N8N7 351 aaPredicted RBP16.61■□□□□ 0.25
PACS1-201ENST00000320580 TMEM102Q8N9M5 508 aaPredicted RBP16.61■□□□□ 0.25
PACS1-201ENST00000320580 CLIP3Q96DZ5 547 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 SIPA1Q96FS4 1042 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 VPS35Q96QK1 796 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 RBM4BQ9BQ04 359 aaKnown RBP16.61■□□□□ 0.25
PACS1-201ENST00000320580 RBM4Q9BWF3 364 aaKnown RBP16.61■□□□□ 0.25
PACS1-201ENST00000320580 MROQ9BYG7 248 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 CPNE5Q9HCH3 593 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 PEX16Q9Y5Y5 336 aa16.61■□□□□ 0.25
PACS1-201ENST00000320580 DDTLA6NHG4 134 aaPredicted RBP16.6■□□□□ 0.25
PACS1-201ENST00000320580 PRR23D1E9PI22 279 aaPredicted RBP16.6■□□□□ 0.25
PACS1-201ENST00000320580 PMM2O15305 246 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 LTA4HP09960 611 aaKnown RBP16.6■□□□□ 0.25
PACS1-201ENST00000320580 PRR23D2P0DMB1 279 aaPredicted RBP16.6■□□□□ 0.25
PACS1-201ENST00000320580 ITGB5P18084 799 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 RFTN1Q14699 578 aaPredicted RBP16.6■□□□□ 0.25
PACS1-201ENST00000320580 TMEM132DQ14C87 1099 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 ZNF284Q2VY69 593 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 INTS11Q5TA45 600 aaKnown RBP16.6■□□□□ 0.25
PACS1-201ENST00000320580 PROSER1Q86XN7 944 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 XYLT1Q86Y38 959 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 CTRCQ99895 268 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 TRIM45Q9H8W5 580 aaPredicted RBP16.6■□□□□ 0.25
PACS1-201ENST00000320580 CCM2LQ9NUG4 571 aaPredicted RBP16.6■□□□□ 0.25
PACS1-201ENST00000320580 YWHAQP27348 245 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 HNF4AP41235 474 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 SLC15A1P46059 708 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 NDST1P52848 882 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 FSCN1Q16658 493 aaKnown RBP16.6■□□□□ 0.25
PACS1-201ENST00000320580 AMHR2Q16671 573 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 C1orf220Q5T0J3 134 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 CACHD1Q5VU97 1274 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 AGAP7PQ5VUJ5 663 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 PCDH19Q8TAB3 1148 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 TMBIM1Q969X1 311 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 SORT1Q99523 831 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 KCNS3Q9BQ31 491 aa16.6■□□□□ 0.25
PACS1-201ENST00000320580 TRIM8Q9BZR9 551 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms