RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CLCN5P51795 746 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 STC1P52823 247 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 ILF2Q12905 390 aaKnown RBP22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 FASTKD1Q53R41 847 aaKnown RBP22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 ZNF805Q5CZA5 627 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 LVRNQ6Q4G3 990 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 TSPAN33Q86UF1 283 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 DYDC1Q8WWB3 177 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 CKAP2Q8WWK9 683 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 CABS1Q96KC9 395 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 C12orf65Q9H3J6 166 aaKnown RBP22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 FBRSL1Q9HCM7 1045 aaKnown RBP22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 PLLPQ9Y342 182 aa22.87■■□□□ 1.25
SMARCB1-201ENST00000263121 PRSS56P0CW18 603 aa22.86■■□□□ 1.25
SMARCB1-201ENST00000263121 CCT5P48643 541 aa22.86■■□□□ 1.25
SMARCB1-201ENST00000263121 PPM1JQ5JR12 505 aa22.86■■□□□ 1.25
SMARCB1-201ENST00000263121 SERPINA13PQ6UXR4 307 aa22.86■■□□□ 1.25
SMARCB1-201ENST00000263121 NUDT18Q6ZVK8 323 aa22.86■■□□□ 1.25
SMARCB1-201ENST00000263121 SDCCAG8Q86SQ7 713 aaPredicted RBP22.86■■□□□ 1.25
SMARCB1-201ENST00000263121 STK40Q8N2I9 435 aa22.86■■□□□ 1.25
SMARCB1-201ENST00000263121 GDAP1Q8TB36 358 aa22.86■■□□□ 1.25
SMARCB1-201ENST00000263121 GRID1Q9ULK0 1009 aa22.86■■□□□ 1.25
SMARCB1-201ENST00000263121 STARD13Q9Y3M8 1113 aa22.86■■□□□ 1.25
SMARCB1-201ENST00000263121 ANTXRLA6NF34 631 aa22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 DHRS4L1P0CG22 281 aa22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 LHCGRP22888 699 aa22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 IL12RB1P42701 662 aa22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 USP10Q14694 798 aaKnown RBP22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 ZKSCAN8Q15776 578 aaPredicted RBP22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 EGFLAMQ63HQ2 1017 aa22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 LRRC66Q68CR7 880 aa22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 SLC41A1Q8IVJ1 513 aa22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 SUGP1Q8IWZ8 645 aaKnown RBP22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 TCF12Q99081 682 aa22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 IQCGQ9H095 443 aaKnown RBP22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 TRPV5Q9NQA5 729 aa22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 INTS10Q9NVR2 710 aaKnown RBP22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 B4GALT6Q9UBX8 382 aa22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 TCF20Q9UGU0 1960 aaKnown RBP22.85■■□□□ 1.25
SMARCB1-201ENST00000263121 A0A096LPK6 155 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 UPK3BL1B0FP48 263 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 UPK3BL2E5RIL1 263 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 GLRA3O75311 464 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 TOP3BO95985 862 aaKnown RBP22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 PRNPP04156 253 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 C2P06681 752 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 TIMP2P16035 220 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 GALK1P51570 392 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 IL9RQ01113 521 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 POU4F1Q01851 419 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 ELAVL3Q14576 367 aaKnown RBP22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 CCDC85BQ15834 202 aaPredicted RBP22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 RBM20Q5T481 1227 aaKnown RBP22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 HHATQ5VTY9 493 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 CBARPQ8N350 705 aaPredicted RBP22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 TMIEQ8NEW7 156 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 OR8D1Q8WZ84 308 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 ELMO2Q96JJ3 720 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 FAM111AQ96PZ2 611 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 OMDQ99983 421 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 P2RY13Q9BPV8 354 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 EPN3Q9H201 632 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 DCDC2Q9UHG0 476 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 CORO1CQ9ULV4 474 aaPredicted RBP22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 A8MX80 341 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 GAPDHSO14556 408 aaPredicted RBP22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 HNRNPLP14866 589 aaKnown RBP eCLIP22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 BPIP17213 487 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 SEMG2Q02383 582 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 ENPP2Q13822 863 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 SEPT7Q16181 437 aaKnown RBP22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 INSCQ1MX18 579 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 PSAPL1Q6NUJ1 521 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 CLEC14AQ86T13 490 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 TAX1BP1Q86VP1 789 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 PIANPQ8IYJ0 282 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 GPATCH11Q8N954 259 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 ACOX2Q99424 681 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 PAIP2Q9BPZ3 127 aaKnown RBP22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 VPS11Q9H270 941 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 SARDHQ9UL12 918 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 PPM1HQ9ULR3 514 aa22.84■■□□□ 1.25
SMARCB1-201ENST00000263121 SPTBN5Q9NRC6 3674 aaKnown RBP22.83■■□□□ 1.25
SMARCB1-201ENST00000263121 C16orf96A6NNT2 1141 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 PMLP29590 882 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 TNFRSF4P43489 277 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 CDKN1CP49918 316 aaPredicted RBP22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 SEC24CP53992 1094 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 TAS2R39P59534 338 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 RAB10P61026 200 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 PTSQ03393 145 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 CACNG1Q06432 222 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 LRRC73Q5JTD7 316 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 CEP97Q8IW35 865 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 MAGEB18Q96M61 343 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 ZNF317Q96PQ6 595 aaPredicted RBP22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 FAM129BQ96TA1 746 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 NDNQ99608 321 aa22.83■■□□□ 1.24
SMARCB1-201ENST00000263121 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms