RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 LRRC49Q8IUZ0 686 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 MAP7D3Q8IWC1 876 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 TP53INP2Q8IXH6 220 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 KCTD6Q8NC69 237 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 TEKT4Q8WW24 435 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 USP7Q93009 1102 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 DTD2Q96FN9 168 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 COQ10AQ96MF6 247 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 ZNF830Q96NB3 372 aaPredicted RBP12.23□□□□□ -0.45
TRAF4-202ENST00000262396 NAP1L5Q96NT1 182 aaPredicted RBP12.23□□□□□ -0.45
TRAF4-202ENST00000262396 SEMA3CQ99985 751 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 SYT11Q9BT88 431 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 POLR1EQ9GZS1 481 aaKnown RBP12.23□□□□□ -0.45
TRAF4-202ENST00000262396 HSD3B7Q9H2F3 369 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 RDH14Q9HBH5 336 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 PCDH18Q9HCL0 1135 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 ETNK2Q9NVF9 386 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 TRNAU1APQ9NX07 287 aaKnown RBP12.23□□□□□ -0.45
TRAF4-202ENST00000262396 TAAR2Q9P1P5 351 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 TMEM63CQ9P1W3 806 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 CD84Q9UIB8 345 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 DNPEPQ9ULA0 475 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 A0A1B0GTH6 734 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 NVLO15381 856 aaKnown RBP12.22□□□□□ -0.45
TRAF4-202ENST00000262396 HTRA2O43464 458 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-202ENST00000262396 NOBOXO60393 691 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 MAFKO60675 156 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 PGLSO95336 258 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 ECEL1O95672 775 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 SERPING1P05155 500 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 PYGLP06737 847 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 TPM3P06753 285 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 AK4P27144 223 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-202ENST00000262396 IL1R2P27930 398 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 CSTF2P33240 577 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRAF4-202ENST00000262396 ATP1A2P50993 1020 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 UBASH3AP57075 661 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 TRAF2Q12933 501 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 HLTFQ14527 1009 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRAF4-202ENST00000262396 TGIF1Q15583 401 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 KCTD16Q68DU8 428 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 PRICKLE2Q7Z3G6 844 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 HSD11B1LQ7Z5J1 315 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 GALNT13Q8IUC8 556 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 CCNYQ8ND76 341 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 GPBAR1Q8TDU6 330 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 SGF29Q96ES7 293 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 SCRN2Q96FV2 425 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 MED8Q96G25 268 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 BTBD6Q96KE9 485 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 OR2M4Q96R27 311 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 SLC38A3Q99624 504 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 MGME1Q9BQP7 344 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 TEX101Q9BY14 249 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 THAP2Q9H0W7 228 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 ISCUQ9H1K1 167 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 DEF6Q9H4E7 631 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 SPATS2LQ9NUQ6 558 aaKnown RBP12.22□□□□□ -0.45
TRAF4-202ENST00000262396 KCNK4Q9NYG8 393 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 CTTNBP2NLQ9P2B4 639 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 PTPRQQ9UMZ3 2332 aa12.22□□□□□ -0.45
TRAF4-202ENST00000262396 CHD5Q8TDI0 1954 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 LOC400499M0QZD8 3231 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 TRBV23OR9-2A0A075B6M9 112 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 PRAMEF33A0A0G2JMD5 474 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 NPIPB15A6NHN6 443 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-202ENST00000262396 INPP4BO15327 924 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 SLC28A2O43868 658 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 PRAMEF10O60809 474 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 CEACAM5P06731 702 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 CES1P23141 567 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 CD82P27701 267 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 ADCY8P40145 1251 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 POLD2P49005 469 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 FANCCQ00597 558 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 CTBSQ01459 385 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 E4F1Q66K89 784 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-202ENST00000262396 LRRC66Q68CR7 880 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 CYP4V2Q6ZWL3 525 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-202ENST00000262396 TSPAN33Q86UF1 283 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 ZFAND4Q86XD8 727 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 SFTPA2Q8IWL1 248 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 NRSN1Q8IZ57 195 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 LPCAT1Q8NF37 534 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 CCHCR1Q8TD31 782 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-202ENST00000262396 IQCDQ96DY2 449 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 SEMA6CQ9H3T2 930 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 RBM22Q9NW64 420 aaKnown RBP eCLIP12.21□□□□□ -0.455e-9■■■■□ 21.3
TRAF4-202ENST00000262396 RCOR3Q9P2K3 495 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-202ENST00000262396 ZNHIT2Q9UHR6 403 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 TMEM98Q9Y2Y6 226 aa12.21□□□□□ -0.45
TRAF4-202ENST00000262396 LUC7L2Q9Y383 392 aaKnown RBP12.21□□□□□ -0.45
TRAF4-202ENST00000262396 B8ZZF3 427 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 STMND1H3BQB6 276 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 FGF1P05230 155 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 IVLP07476 585 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 TCF4P15884 667 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 ZNF30P17039 623 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 MX2P20592 715 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms