RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ATL2Q8NHH9 583 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 TEKT5Q96M29 485 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 TRIB3Q96RU7 358 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 LYSMD1Q96S90 227 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 GLOD4Q9HC38 313 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 MRPL40Q9NQ50 206 aaKnown RBP22.93■■□□□ 1.26
LSM4-201ENST00000252816 CD84Q9UIB8 345 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 DGKBQ9Y6T7 804 aa22.93■■□□□ 1.26
LSM4-201ENST00000252816 KNTC1P50748 2209 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 MACROD2A1Z1Q3 448 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 ANKRD66B4E2M5 251 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 CLDN7O95471 211 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 ANXA6P08133 673 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 ZNF30P17039 623 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 COPS2P61201 443 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 DPTQ07507 201 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 GALNT3Q14435 633 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 HES3Q5TGS1 186 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 KDF1Q8NAX2 398 aaPredicted RBP22.92■■□□□ 1.26
LSM4-201ENST00000252816 SPATA22Q8NHS9 363 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 ALG3Q92685 438 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 BOCQ9BWV1 1114 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 TEX101Q9BY14 249 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 ABCG8Q9H221 673 aa22.92■■□□□ 1.26
LSM4-201ENST00000252816 CCDC66A2RUB6 948 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 GOLGA6CA6NDK9 693 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 GOLGA6BA6NDN3 693 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 TNFRSF10CO14798 259 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 MT-CYBP00156 380 aaPredicted RBP22.91■■□□□ 1.26
LSM4-201ENST00000252816 SOD1P00441 154 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 TNFP01375 233 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 GOLGA6DP0CG33 693 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 MYCLP1P12525 358 aaPredicted RBP22.91■■□□□ 1.26
LSM4-201ENST00000252816 CTSEP14091 401 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 CD68P34810 354 aaPredicted RBP22.91■■□□□ 1.26
LSM4-201ENST00000252816 CDK3Q00526 305 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 INSM1Q01101 510 aaPredicted RBP22.91■■□□□ 1.26
LSM4-201ENST00000252816 KIF5AQ12840 1032 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 CAMK2BQ13554 666 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 ELOCQ15369 112 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 AADACL2Q6P093 401 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 KDELC2Q7Z4H8 507 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 FSTL5Q8N475 847 aaPredicted RBP22.91■■□□□ 1.26
LSM4-201ENST00000252816 SCAMP4Q969E2 229 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 QKIQ96PU8 341 aaKnown RBP eCLIP22.91■■□□□ 1.26
LSM4-201ENST00000252816 MLPHQ9BV36 600 aaPredicted RBP22.91■■□□□ 1.26
LSM4-201ENST00000252816 USP29Q9HBJ7 922 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 PHPT1Q9NRX4 125 aaPredicted RBP22.91■■□□□ 1.26
LSM4-201ENST00000252816 GOLGA6AQ9NYA3 693 aa22.91■■□□□ 1.26
LSM4-201ENST00000252816 DMXL2Q8TDJ6 3036 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 CAPNS1P04632 268 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 KELP23276 732 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 TEAD1P28347 426 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 PCSK7Q16549 785 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 C6orf132Q5T0Z8 1188 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 RAET1GQ6H3X3 334 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 GUSBP11Q6P575 273 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 SLC35F3Q8IY50 421 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 AP2M1Q96CW1 435 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 AGAP2Q99490 1192 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 ADGRE3Q9BY15 652 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 OSBPL8Q9BZF1 889 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 C10orf88Q9H8K7 445 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 DNPEPQ9ULA0 475 aa22.9■■□□□ 1.26
LSM4-201ENST00000252816 KMT2BQ9UMN6 2715 aaPredicted RBP22.9■■□□□ 1.26
LSM4-201ENST00000252816 C1orf232A0A0U1RR37 186 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 APOC4-APOC2K7ER74 178 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 ZZEF1O43149 2961 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 APOC2P02655 101 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 FUCA1P04066 466 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 PYGMP11217 842 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 JUPP14923 745 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 PTPN7P35236 360 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 DUSP3P51452 185 aaPredicted RBP22.89■■□□□ 1.25
LSM4-201ENST00000252816 RWDD2BP57060 319 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 E2F1Q01094 437 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 SLC14A2Q15849 920 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 ZNF765Q7L2R6 523 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 IFI44Q8TCB0 444 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 PTCD2Q8WV60 388 aaKnown RBP22.89■■□□□ 1.25
LSM4-201ENST00000252816 FRMD8Q9BZ67 464 aaPredicted RBP22.89■■□□□ 1.25
LSM4-201ENST00000252816 CYP4F12Q9HCS2 524 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 UBP1Q9NZI7 540 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 AMFRQ9UKV5 643 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 EFR3BQ9Y2G0 817 aa22.89■■□□□ 1.25
LSM4-201ENST00000252816 ASXL3Q9C0F0 2248 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 PRSS38A1L453 326 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 CPED1A4D0V7 1026 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 TMEM8BA6NDV4 472 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 GOLGA6L6A8MZA4 724 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 HACD1B0YJ81 288 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 PDE2AO00408 941 aaPredicted RBP22.88■■□□□ 1.25
LSM4-201ENST00000252816 MTSS1O43312 755 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 PMPCBO75439 489 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 CEACAM5P06731 702 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 PIRTP0C851 137 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 NFKB1P19838 968 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 GPR1P46091 355 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 CDK18Q07002 472 aa22.88■■□□□ 1.25
LSM4-201ENST00000252816 NOMO1Q15155 1222 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms