RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 JAMLQ86YT9 394 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 KATNAL2Q8IYT4 538 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 IQCKQ8N0W5 287 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 C3orf20Q8ND61 904 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 OR6K2Q8NGY2 324 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 LMX1AQ8TE12 382 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 CENPIQ92674 756 aaPredicted RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 SLCO2A1Q92959 643 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 GLMNQ92990 594 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 CENPTQ96BT3 561 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 TBC1D31Q96DN5 1066 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 TRIM7Q9C029 511 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 THSD1Q9NS62 852 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 NDFIP2Q9NV92 336 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 SPASTQ9UBP0 616 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 GCN1Q92616 2671 aaKnown RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 CPED1A4D0V7 1026 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 CAPN8A6NHC0 703 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 FAM72CH0Y354 149 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 TOR1BO14657 336 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 AREL1O15033 823 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 KDELR3O43731 214 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 LRIG2O94898 1065 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 UGT2B4P06133 528 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 RARAP10276 462 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 TGM2P21980 687 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 RPIAP49247 311 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 THOP1P52888 689 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 TMPRSS3P57727 454 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 YPEL5P62699 121 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 PIGHQ14442 188 aaPredicted RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 SIX1Q15475 284 aaPredicted RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 TRADDQ15628 312 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 CDKN3Q16667 212 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 DEFB133Q30KQ1 61 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 RAB6CQ53S08 254 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 TPRG1LQ5T0D9 272 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 FAM72AQ5TYM5 149 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 LRRC38Q5VT99 294 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 FAM72DQ6L9T8 149 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 GUSBP11Q6P575 273 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 LRIG3Q6UXM1 1119 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 EFL1Q7Z2Z2 1120 aaKnown RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 PHLDB2Q86SQ0 1253 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 TTC7BQ86TV6 843 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 FAM72BQ86X60 149 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 EXD1Q8NHP7 514 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 NTAN1Q96AB6 310 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 NAF1Q96HR8 494 aaKnown RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 KLHL32Q96NJ5 620 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 ZIM3Q96PE6 472 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 TRIM51Q9BSJ1 452 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 BOCQ9BWV1 1114 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 C1QTNF7Q9BXJ2 289 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 DPH1Q9BZG8 443 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 RAB6CQ9H0N0 254 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 ASCL3Q9NQ33 180 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 FEZ2Q9UHY8 353 aaPredicted RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 GGT7Q9UJ14 662 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 ITM2BQ9Y287 266 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 HELZ2Q9BYK8 2649 aaKnown RBP12.71□□□□□ -0.37
CTSD-208ENST00000636843 LMO7DNF2Z398 122 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 ERVH48-1M5A8F1 160 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 TCEA3O75764 348 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 TM7SF2O76062 418 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 RBMS1P29558 406 aaKnown RBP12.71□□□□□ -0.38
CTSD-208ENST00000636843 RHDQ02161 417 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 INO80DQ53TQ3 878 aaPredicted RBP12.71□□□□□ -0.38
CTSD-208ENST00000636843 PPP1R15BQ5SWA1 713 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 DCUN1D2Q6PH85 259 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 GDPD4Q6W3E5 623 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 SYDE1Q6ZW31 735 aaPredicted RBP12.71□□□□□ -0.38
CTSD-208ENST00000636843 PHACTR4Q8IZ21 702 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 NIPA2Q8N8Q9 360 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 JOSD2Q8TAC2 188 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 WDR48Q8TAF3 677 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 GRK7Q8WTQ7 553 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 KCNE4Q8WWG9 221 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 NAT6Q93015 286 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 VOPP1Q96AW1 172 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 WBP1Q96G27 269 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 RBM41Q96IZ5 413 aaKnown RBP12.71□□□□□ -0.38
CTSD-208ENST00000636843 DPH5Q9H2P9 285 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 DKK3Q9UBP4 350 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 APOBEC3BQ9UH17 382 aaKnown RBP12.71□□□□□ -0.38
CTSD-208ENST00000636843 NEU3Q9UQ49 428 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 MFHAS1Q9Y4C4 1052 aa12.71□□□□□ -0.38
CTSD-208ENST00000636843 TMCC1O94876 653 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 ANXA6P08133 673 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 KRT3P12035 628 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 IGFALSP35858 605 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 SUOXP51687 545 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 HDAC4P56524 1084 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 PRRT3Q5FWE3 981 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 ATXN7L2Q5T6C5 722 aaPredicted RBP12.7□□□□□ -0.38
CTSD-208ENST00000636843 TTC27Q6P3X3 843 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 RBM44Q6ZP01 1051 aaKnown RBP12.7□□□□□ -0.38
CTSD-208ENST00000636843 RCOR2Q8IZ40 523 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 ZNF843Q8N446 348 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 CCDC185Q8N715 623 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms