RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 HK3P52790 923 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 RWDD2BP57060 319 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 SRP54P61011 504 aaKnown RBP11.56□□□□□ -0.56
CCDC12-209ENST00000604164 SEMG2Q02383 582 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 XRCC4Q13426 336 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 PEX6Q13608 980 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 SMAD1Q15797 465 aaKnown RBP11.56□□□□□ -0.56
CCDC12-209ENST00000604164 TEX44Q53QW1 395 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 PRRT3Q5FWE3 981 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 DENND2CQ68D51 928 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 ENPP7Q6UWV6 458 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 UNQ6494/PRO21346Q6UXR6 183 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 GKN2Q86XP6 184 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 NRSN1Q8IZ57 195 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.56□□□□□ -0.56
CCDC12-209ENST00000604164 CCDC112Q8NEF3 446 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 OR56A4Q8NGH8 313 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 CCHCR1Q8TD31 782 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 DTD2Q96FN9 168 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 NSMCE3Q96MG7 304 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 SLC25A51Q9H1U9 297 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 KLK13Q9UKR3 277 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 CHKBQ9Y259 395 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 OR1A2Q9Y585 309 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 DGKBQ9Y6T7 804 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 NCOR2Q9Y618 2525 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 SHROOM3Q8TF72 1996 aa11.56□□□□□ -0.56
CCDC12-209ENST00000604164 RGSL1A5PLK6 1076 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 APOC4-APOC2K7ER74 178 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 TJP3O95049 919 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 APOC2P02655 101 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 PTMAP06454 111 aaKnown RBP11.55□□□□□ -0.56
CCDC12-209ENST00000604164 PROS1P07225 676 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 PDHA1P08559 390 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 MYCLP1P12525 358 aaPredicted RBP11.55□□□□□ -0.56
CCDC12-209ENST00000604164 CTPS1P17812 591 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 SPINK2P20155 84 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 PTPN7P35236 360 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 DPTQ07507 201 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 NIPAL4Q0D2K0 466 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 ZBTB17Q13105 803 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 DNAJC3Q13217 504 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 PRKD1Q15139 912 aaPredicted RBP11.55□□□□□ -0.56
CCDC12-209ENST00000604164 NR0B2Q15466 257 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 LRRC66Q68CR7 880 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 DHRS13Q6UX07 377 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 NPNTQ6UXI9 565 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 CCNI2Q6ZMN8 369 aaPredicted RBP11.55□□□□□ -0.56
CCDC12-209ENST00000604164 BBS12Q6ZW61 710 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 ZNF765Q7L2R6 523 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 PEX26Q7Z412 305 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 NLRP8Q86W28 1048 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 HID1Q8IV36 788 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 CACTIN-AS1Q8N1I8 211 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 CBARPQ8N350 705 aaPredicted RBP11.55□□□□□ -0.56
CCDC12-209ENST00000604164 RNF10Q8N5U6 811 aaKnown RBP11.55□□□□□ -0.56
CCDC12-209ENST00000604164 ACRBPQ8NEB7 543 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 LPCAT1Q8NF37 534 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 NAT6Q93015 286 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 HAUS1Q96CS2 278 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 IMP4Q96G21 291 aaKnown RBP11.55□□□□□ -0.56
CCDC12-209ENST00000604164 APOLD1Q96LR9 279 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 AGAP3Q96P47 875 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 LYSMD1Q96S90 227 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 MLPHQ9BV36 600 aaPredicted RBP11.55□□□□□ -0.56
CCDC12-209ENST00000604164 CDH19Q9H159 772 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 GOLPH3Q9H4A6 298 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 RAD18Q9NS91 495 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 TRHDEQ9UKU6 1024 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 AMFRQ9UKV5 643 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 TFR2Q9UP52 801 aa11.55□□□□□ -0.56
CCDC12-209ENST00000604164 REXO2Q9Y3B8 237 aaKnown RBP11.55□□□□□ -0.56
CCDC12-209ENST00000604164 ANKRD36A6QL64 1941 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 MACROD2A1Z1Q3 448 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 GOLGA6CA6NDK9 693 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 GOLGA6BA6NDN3 693 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 ANKRD66B4E2M5 251 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 KRT86O43790 486 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 STK10O94804 968 aaKnown RBP11.54□□□□□ -0.56
CCDC12-209ENST00000604164 TOP3BO95985 862 aaKnown RBP11.54□□□□□ -0.56
CCDC12-209ENST00000604164 GOLGA6DP0CG33 693 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 JUPP14923 745 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 LHCGRP22888 699 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 ETV3P41162 512 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 SKOR1P84550 965 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 ALG11Q2TAA5 492 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 TPRG1LQ5T0D9 272 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 C6orf132Q5T0Z8 1188 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 RAET1GQ6H3X3 334 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 CRTC1Q6UUV9 634 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 RD3Q7Z3Z2 195 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 HSD11B1LQ7Z5J1 315 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 ZC3H18Q86VM9 953 aaKnown RBP11.54□□□□□ -0.56
CCDC12-209ENST00000604164 TMEM139Q8IV31 216 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 CNTD1Q8N815 330 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 PLA2G15Q8NCC3 412 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 KRT35Q92764 455 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 GATA6Q92908 595 aa11.54□□□□□ -0.56
CCDC12-209ENST00000604164 FUBP1Q96AE4 644 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms