RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 IMPACTQ9P2X3 320 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 DKK4Q9UBT3 224 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 KLF15Q9UIH9 416 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 OR1A2Q9Y585 309 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 ARID1BQ8NFD5 2236 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 TDRD6O60522 2096 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 DSPP15924 2871 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 A0A0J9YYE9 177 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 CAPN8A6NHC0 703 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 BTNL10A8MVZ5 291 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 ZRANB2O95218 330 aaKnown RBP eCLIP17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 TNFP01375 233 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 JCHAINP01591 159 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 TRBC1P01850 177 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 MYCLP1P12525 358 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 TNNT1P13805 278 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 CDC25BP30305 580 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 CDKN2BP42772 138 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 NR0B2Q15466 257 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 ALG11Q2TAA5 492 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 TFDP3Q5H9I0 405 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 C6orf132Q5T0Z8 1188 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 HES3Q5TGS1 186 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 PNCKQ6P2M8 343 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 ZNF765Q7L2R6 523 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 DAAM2Q86T65 1068 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 RCOR2Q8IZ40 523 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 OR56A4Q8NGH8 313 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 ARRDC2Q8TBH0 407 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 FUBP1Q96AE4 644 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 NXPE2Q96DL1 559 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 LGMNQ99538 433 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 BOCQ9BWV1 1114 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 PCDH9Q9HC56 1237 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 PKD1L2Q7Z442 2459 aa17.75■□□□□ 0.43
SHKBP1-204ENST00000594862 LRP4O75096 1905 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 SOWAHDA6NJG2 315 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 A8MX80 341 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 KCNK1O00180 336 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 GM2AP17900 193 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 LHCGRP22888 699 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 DPTQ07507 201 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 DEFB133Q30KQ1 61 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 MFSD7Q6UXD7 560 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 KDM7AQ6ZMT4 941 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 SPOCD1Q6ZMY3 1216 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 CBARPQ8N350 705 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 PLA2G15Q8NCC3 412 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 EXD1Q8NHP7 514 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 WDR48Q8TAF3 677 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 LYSMD1Q96S90 227 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 RBM15Q96T37 977 aaKnown RBP eCLIP17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 ZMIZ1Q9ULJ6 1067 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 CLCA2Q9UQC9 943 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 HYOU1Q9Y4L1 999 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 PLXNB3Q9ULL4 1909 aa17.74■□□□□ 0.43
SHKBP1-204ENST00000594862 PDHA1P08559 390 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 CTPS1P17812 591 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 COPS2P61201 443 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 DYNLT1P63172 113 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 PEX6Q13608 980 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 PPP2R5EQ16537 467 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 LRRC66Q68CR7 880 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 DENND2CQ68D51 928 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 NLRP8Q86W28 1048 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 CCDC50Q8IVM0 306 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 NRSN1Q8IZ57 195 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 ARL10Q8N8L6 244 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 TFB1MQ8WVM0 346 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 P3H4Q92791 437 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 SRPK1Q96SB4 655 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 BAG1Q99933 345 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 FERMT1Q9BQL6 677 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 TEX101Q9BY14 249 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 ABCG4Q9H172 646 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 TCEAL2Q9H3H9 227 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 LAMA5O15230 3695 aa17.73■□□□□ 0.43
SHKBP1-204ENST00000594862 CCDC66A2RUB6 948 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 EME2A4GXA9 379 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 YY2O15391 372 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 CST8O60676 142 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 GCATO75600 419 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 ZNF189O75820 626 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 ETV3P41162 512 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 CETN2P41208 172 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 CD86P42081 329 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 VAV2P52735 878 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 NAP1L1P55209 391 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 INSM1Q01101 510 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 NIPAL4Q0D2K0 466 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 ZBTB17Q13105 803 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 CAMK2BQ13554 666 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 PRKD1Q15139 912 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 RAET1GQ6H3X3 334 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 RD3Q7Z3Z2 195 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 HSD11B1LQ7Z5J1 315 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 NT5DC3Q86UY8 548 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 HEATR4Q86WZ0 1026 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 GAS2L3Q86XJ1 694 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 PROSER1Q86XN7 944 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms