RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 IL22Q9GZX6 179 aa13.63□□□□□ -0.23
VMP1-210ENST00000589823 DUSP15Q9H1R2 295 aaPredicted RBP13.63□□□□□ -0.23
VMP1-210ENST00000589823 KCTD5Q9NXV2 234 aa13.63□□□□□ -0.23
VMP1-210ENST00000589823 PKD2L2Q9NZM6 624 aa13.63□□□□□ -0.23
VMP1-210ENST00000589823 DMGDHQ9UI17 866 aaKnown RBP13.63□□□□□ -0.23
VMP1-210ENST00000589823 PKP3Q9Y446 797 aa13.63□□□□□ -0.23
VMP1-210ENST00000589823 PLXND1Q9Y4D7 1925 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 ESYT3A0FGR9 886 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 HEATR9A2RTY3 570 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 WNT9AO14904 365 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 STX7O15400 261 aaKnown RBP13.62□□□□□ -0.23
VMP1-210ENST00000589823 C1SP09871 688 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 LPOP22079 712 aaPredicted RBP13.62□□□□□ -0.23
VMP1-210ENST00000589823 ADRA1DP25100 572 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 MGAT1P26572 445 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 PLTPP55058 493 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 ARL4CP56559 192 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 CDKN3Q16667 212 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 ZNF284Q2VY69 593 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 PLK5Q496M5 336 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 DNAJC21Q5F1R6 531 aaKnown RBP13.62□□□□□ -0.23
VMP1-210ENST00000589823 PRR23BQ6ZRT6 265 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 HSD11B1LQ7Z5J1 315 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 TMC3Q7Z5M5 1100 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 CAND1Q86VP6 1230 aaKnown RBP13.62□□□□□ -0.23
VMP1-210ENST00000589823 RAVER1Q8IY67 606 aaKnown RBP13.62□□□□□ -0.23
VMP1-210ENST00000589823 PDIK1LQ8N165 341 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 TTC30BQ8N4P2 665 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 PRSS33Q8NF86 280 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 ASB12Q8WXK4 309 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 SEC14L1Q92503 715 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 BIRC7Q96CA5 298 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 COQ10AQ96MF6 247 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 HSPA12BQ96MM6 686 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 C1QTNF2Q9BXJ5 285 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 KCNH6Q9H252 994 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 RRAGDQ9NQL2 400 aaPredicted RBP13.62□□□□□ -0.23
VMP1-210ENST00000589823 RAD18Q9NS91 495 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 GRHL1Q9NZI5 618 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 SAMD15Q9P1V8 674 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.62□□□□□ -0.23
VMP1-210ENST00000589823 COQ6Q9Y2Z9 468 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 ARL5AQ9Y689 179 aa13.62□□□□□ -0.23
VMP1-210ENST00000589823 ZNF318Q5VUA4 2279 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 RGSL1A5PLK6 1076 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 SDR42E2A6NKP2 422 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 GOLGA8CPA6NN73 597 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 AURKAO14965 403 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 SLC31A1O15431 190 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 LATO43561 262 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 PPFIA2O75334 1257 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 AVILO75366 819 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 RECQL5O94762 991 aaPredicted RBP13.61□□□□□ -0.23
VMP1-210ENST00000589823 PAK4O96013 591 aaPredicted RBP13.61□□□□□ -0.23
VMP1-210ENST00000589823 IGHV4-34P06331 123 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 HNRNPA2B1P22626 353 aaKnown RBP13.61□□□□□ -0.23
VMP1-210ENST00000589823 AKT2P31751 481 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 HMGCLP35914 325 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 ETV3P41162 512 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 DHPSP49366 369 aaPredicted RBP13.61□□□□□ -0.23
VMP1-210ENST00000589823 PTPN5P54829 565 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 MSLNQ13421 630 aaPredicted RBP13.61□□□□□ -0.23
VMP1-210ENST00000589823 MTM1Q13496 603 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 HIF1AQ16665 826 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 PCID2Q5JVF3 399 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 WDR45BQ5MNZ6 344 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 ZDHHC20Q5W0Z9 365 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 LYSMD4Q5XG99 296 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 PMS2CLQ68D20 193 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 CASC4Q6P4E1 433 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 ARMCX6Q7L4S7 300 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 NLRP9Q7RTR0 991 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 IFT20Q8IY31 132 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 NRSN1Q8IZ57 195 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 RGL4Q8IZJ4 473 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 CBARPQ8N350 705 aaPredicted RBP13.61□□□□□ -0.23
VMP1-210ENST00000589823 IFT81Q8WYA0 676 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 ART4Q93070 314 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 NUS1Q96E22 293 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 DTD2Q96FN9 168 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 ZC3H10Q96K80 434 aaKnown RBP13.61□□□□□ -0.23
VMP1-210ENST00000589823 RANBP9Q96S59 729 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 FAM129AQ9BZQ8 928 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 RAB23Q9ULC3 237 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 DMTF1Q9Y222 760 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 R4GN57 208 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 EML5Q05BV3 1969 aa13.61□□□□□ -0.23
VMP1-210ENST00000589823 A0A1W2PPC4 97 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 MAGEB16A2A368 324 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 BHMG1C9JSJ3 638 aaPredicted RBP13.6□□□□□ -0.23
VMP1-210ENST00000589823 LDB2O43679 373 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 BUD23O43709 281 aaKnown RBP13.6□□□□□ -0.23
VMP1-210ENST00000589823 CD27P26842 260 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 HADHAP40939 763 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 MAGEA3P43357 314 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 SPINT3P49223 89 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 CREB5Q02930 508 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 TCF15Q12870 199 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 FGL2Q14314 439 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 HLTFQ14527 1009 aaKnown RBP eCLIP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms