RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 PLEKHG6Q3KR16 790 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 ZNF789Q5FWF6 425 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 PITRM1Q5JRX3 1037 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 RALGPS1Q5JS13 557 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 PRSS36Q5K4E3 855 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 C9orf50Q5SZB4 431 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 HECTD2Q5U5R9 776 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 PDE12Q6L8Q7 609 aaKnown RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 LRRC8EQ6NSJ5 796 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 MRNIPQ6NTE8 343 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 ELMSAN1Q6PJG2 1045 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 AFTPHQ6ULP2 937 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 GRASPQ7Z6J2 395 aaPredicted RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 GALNT7Q86SF2 657 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 LCA5Q86VQ0 697 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 RYBPQ8N488 228 aaPredicted RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 PAF1Q8N7H5 531 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 GBP7Q8N8V2 638 aaPredicted RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 OR4K2Q8NGD2 314 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 GPR150Q8NGU9 434 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 OR6K2Q8NGY2 324 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 RIN3Q8TB24 985 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 PPM1EQ8WY54 764 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 SAMD11Q96NU1 681 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 SMIM14Q96QK8 99 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 OLFM1Q99784 485 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 OMDQ99983 421 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 ZMYND15Q9H091 742 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 MYLK2Q9H1R3 596 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 ZNF395Q9H8N7 513 aaPredicted RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 TDP1Q9NUW8 608 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 THAP1Q9NVV9 213 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 NLE1Q9NVX2 485 aaPredicted RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 THEGQ9P2T0 379 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 COPG2Q9UBF2 871 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 RUVBL2Q9Y230 463 aaKnown RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 ACOT9Q9Y305 439 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 SOBPA7XYQ1 873 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ANKRD66B4E2M5 251 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 G3V2L1 256 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ZNF197O14709 1029 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 MAP3K7O43318 606 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ITM2AO43736 263 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 DNAJC6O75061 913 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 H2AFYO75367 372 aaKnown RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 FSBPO95073 299 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 KLHL2O95198 593 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 PIGNO95427 931 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 IGSF6O95976 241 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 KITP10721 976 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 RALBP11234 206 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 CTPS1P17812 591 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 OGNP20774 298 aaKnown RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 GRK2P25098 689 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 PMLP29590 882 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 SLC8A1P32418 973 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 CTSOP43234 321 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 MAPK8P45983 427 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 GRIA4P48058 902 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 GLRBP48167 497 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 KPNA2P52292 529 aaKnown RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 PLK1P53350 603 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ABCE1P61221 599 aaKnown RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 DLG1Q12959 904 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ITGA9Q13797 1035 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 SEMA3AQ14563 771 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 GRIN2CQ14957 1233 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ZNF77Q15935 545 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 TSNAXIP1Q2TAA8 658 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 FUT11Q495W5 492 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 GALNTL6Q49A17 601 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 TMEM31Q5JXX7 168 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ARMC12Q5T9G4 340 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 FAM45BPQ6NSW5 357 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ZYG11AQ6WRX3 759 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ADGRD2Q7Z7M1 963 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 SDCCAG8Q86SQ7 713 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 TBC1D1Q86TI0 1168 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 RBM23Q86U06 439 aaKnown RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 METTL3Q86U44 580 aaKnown RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 TMEM25Q86YD3 366 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ARID3BQ8IVW6 561 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 C10orf67Q8IYJ2 551 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 CENPLQ8N0S6 344 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 MICALL1Q8N3F8 863 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 FITM2Q8N6M3 262 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 PNPLA1Q8N8W4 532 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 MDGA1Q8NFP4 955 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 OR4L1Q8NH43 312 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 TTC8Q8TAM2 541 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 RDH11Q8TC12 318 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 FAM45AQ8TCE6 357 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 PPP4R1Q8TF05 950 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ACDQ96AP0 544 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 NXNL1Q96CM4 212 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ERP27Q96DN0 273 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 CDKN2AIPNLQ96HQ2 116 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 LMLNQ96KR4 655 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ZSWIM3Q96MP5 696 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms