RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 MAGOHP61326 146 aaKnown RBP31.06■■■□□ 2.56
CAPNS1-206ENST00000588815 MRPS21P82921 87 aaKnown RBP31.06■■■□□ 2.56
CAPNS1-206ENST00000588815 CAMK2GQ13555 558 aaPredicted RBP31.06■■■□□ 2.56
CAPNS1-206ENST00000588815 EMC10Q5UCC4 262 aa31.06■■■□□ 2.56
CAPNS1-206ENST00000588815 SDE2Q6IQ49 451 aa31.06■■■□□ 2.56
CAPNS1-206ENST00000588815 FSTL4Q6MZW2 842 aa31.06■■■□□ 2.56
CAPNS1-206ENST00000588815 AFTPHQ6ULP2 937 aa31.06■■■□□ 2.56
CAPNS1-206ENST00000588815 TRABD2AQ86V40 505 aa31.06■■■□□ 2.56
CAPNS1-206ENST00000588815 GPR150Q8NGU9 434 aa31.06■■■□□ 2.56
CAPNS1-206ENST00000588815 OR6P1Q8NGX9 317 aa31.06■■■□□ 2.56
CAPNS1-206ENST00000588815 PIP4K2CQ8TBX8 421 aa31.06■■■□□ 2.56
CAPNS1-206ENST00000588815 ACOX2Q99424 681 aa31.06■■■□□ 2.56
CAPNS1-206ENST00000588815 EYSQ5T1H1 3165 aa31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 C16orf96A6NNT2 1141 aa31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 XPAP23025 273 aaPredicted RBP31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 NTSR1P30989 418 aa31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 ARSDP51689 593 aa31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 PTPN5P54829 565 aa31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 FAM46CQ5VWP2 391 aa31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 C2CD4AQ8NCU7 369 aaPredicted RBP31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 MAFAQ8NHW3 353 aaPredicted RBP31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 SMIM14Q96QK8 99 aa31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 AGAP2Q99490 1192 aa31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 POLR3BQ9NW08 1133 aaPredicted RBP31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 GGT7Q9UJ14 662 aa31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 DUSP12Q9UNI6 340 aa31.05■■■□□ 2.56
CAPNS1-206ENST00000588815 KPNA3O00505 521 aaPredicted RBP31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 UGT1A9O60656 530 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 FAM155BO75949 473 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 HSF5Q4G112 596 aaPredicted RBP31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 MRNIPQ6NTE8 343 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 STRA8Q7Z7C7 330 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 EXOC3L1Q86VI1 746 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 ADHFE1Q8IWW8 467 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 CBARPQ8N350 705 aaPredicted RBP31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 ARFGAP2Q8N6H7 521 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 OR4L1Q8NH43 312 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 MZB1Q8WU39 189 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 RBBP8Q99708 897 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 GABRG3Q99928 467 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 UGT1A7Q9HAW7 530 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 UGT1A10Q9HAW8 530 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 UGT1A8Q9HAW9 530 aa31.04■■■□□ 2.56
CAPNS1-206ENST00000588815 NPIPB15A6NHN6 443 aaPredicted RBP31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 MAN2B1O00754 1011 aa31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 NARSO43776 548 aaKnown RBP31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 EGFP01133 1207 aa31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 CHRM1P11229 460 aaPredicted RBP31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 TIMP2P16035 220 aa31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 OGNP20774 298 aaKnown RBP31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 TIE1P35590 1138 aa31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 SLC44A4Q53GD3 710 aa31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 ZDHHC20Q5W0Z9 365 aa31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 CRTC1Q6UUV9 634 aa31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 FAM76AQ8TAV0 307 aa31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 PSAT1Q9Y617 370 aa31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 LRRK1Q38SD2 2015 aa31.03■■■□□ 2.56
CAPNS1-206ENST00000588815 GOLGA8TH3BQL2 631 aa31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 BUD23O43709 281 aaKnown RBP31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 SYNCRIPO60506 623 aaKnown RBP31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 RNASEH1O60930 286 aaKnown RBP31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 GOT2P00505 430 aaKnown RBP31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 VIPR1P32241 457 aa31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 LIMK2P53671 638 aa31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 TMPRSS15P98073 1019 aa31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 ZNF470Q6ECI4 717 aa31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 TIFABQ6ZNK6 161 aa31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 TTC7BQ86TV6 843 aa31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 RAVER1Q8IY67 606 aaKnown RBP31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 MCMBPQ9BTE3 642 aa31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 DYRK4Q9NR20 520 aa31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 APPL1Q9UKG1 709 aa31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 FBXO5Q9UKT4 447 aa31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 SARDHQ9UL12 918 aa31.02■■■□□ 2.56
CAPNS1-206ENST00000588815 CCDC162PA2VCL2 907 aa31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 CLDN7O95471 211 aa31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 NR1D1P20393 614 aa31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 TFF2Q03403 129 aa31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 ARHGEF7Q14155 803 aa31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 ERAP2Q6P179 960 aa31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 PTAR1Q7Z6K3 402 aaPredicted RBP31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 CILP2Q8IUL8 1156 aa31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 FAM3CQ92520 227 aa31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 ALKBH8Q96BT7 664 aaKnown RBP31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 RSPH9Q9H1X1 276 aaPredicted RBP31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 RHOJQ9H4E5 214 aa31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 CATSPERZQ9NTU4 200 aa31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 B4GALT6Q9UBX8 382 aa31.01■■■□□ 2.56
CAPNS1-206ENST00000588815 CD3EAPO15446 510 aaKnown RBP31.01■■■□□ 2.55
CAPNS1-206ENST00000588815 PLXNA2O75051 1894 aa31.01■■■□□ 2.55
CAPNS1-206ENST00000588815 IL1BP01584 269 aa31.01■■■□□ 2.55
CAPNS1-206ENST00000588815 ITGA2BP08514 1039 aa31.01■■■□□ 2.55
CAPNS1-206ENST00000588815 SLC1A2P43004 574 aa31.01■■■□□ 2.55
CAPNS1-206ENST00000588815 POLD2P49005 469 aa31.01■■■□□ 2.55
CAPNS1-206ENST00000588815 SEC13P55735 322 aa31.01■■■□□ 2.55
CAPNS1-206ENST00000588815 ELP6Q0PNE2 266 aa31.01■■■□□ 2.55
CAPNS1-206ENST00000588815 PTPRCAPQ14761 206 aa31.01■■■□□ 2.55
CAPNS1-206ENST00000588815 STARD3Q14849 445 aa31.01■■■□□ 2.55
CAPNS1-206ENST00000588815 LRRC66Q68CR7 880 aa31.01■■■□□ 2.55
CAPNS1-206ENST00000588815 DPPA4Q7L190 304 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms