RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 TCAIMQ8N3R3 496 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 HAS1Q92839 578 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 C1QTNF1Q9BXJ1 281 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 EVA1BQ9NVM1 165 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 MRPS33Q9Y291 106 aaKnown RBP13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 AGLP35573 1532 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 PLOD3O60568 738 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 FGBP02675 491 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 SMCO1Q147U7 214 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 TPGS1Q6ZTW0 290 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 OAFQ86UD1 273 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 ADGRG2Q8IZP9 1017 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 PDPRQ8NCN5 879 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 ACO2Q99798 780 aaKnown RBP13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 S100A14Q9HCY8 104 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 HBS1LQ9Y450 684 aaKnown RBP13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 ABCA6Q8N139 1617 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 E9PCH4 1651 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 SLIT1O75093 1534 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 C2P06681 752 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 CDH5P33151 784 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 CYP4F2P78329 520 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 MRPS5P82675 430 aaKnown RBP13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 CYP4F3Q08477 520 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 RAET1GQ6H3X3 334 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 PLPPR4Q7Z2D5 763 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 CLNKQ7Z7G1 428 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 AKAP14Q86UN6 197 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 ALYREFQ86V81 257 aaKnown RBP13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 MEIOBQ8N635 442 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 CPSF7Q8N684 471 aaKnown RBP13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 GSTCDQ8NEC7 633 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 PIH1D2Q8WWB5 315 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 SLC44A1Q8WWI5 657 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 LINGO1Q96FE5 620 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 LGMNQ99538 433 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 MRIQ9BWK5 157 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 ACP6Q9NPH0 428 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 EURLQ9NYK6 297 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 ZNHIT2Q9UHR6 403 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 PLLPQ9Y342 182 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 CEP152O94986 1710 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 FAM240BA0A1B0GVZ2 78 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 ERAL1O75616 437 aaKnown RBP13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 TM7SF2O76062 418 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 LINC00032P0C843 101 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 RPL7AP62424 266 aaKnown RBP13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 SCIMPQ6UWF3 145 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 TMPRSS11AQ6ZMR5 421 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 CHSY3Q70JA7 882 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 RIOX2Q8IUF8 465 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 LHX5Q9H2C1 402 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 GPN1Q9HCN4 374 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 AGO1Q9UL18 857 aaKnown RBP13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 RAB26Q9ULW5 256 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 SLC27A6Q9Y2P4 619 aa13.21□□□□□ -0.29
CSPG4P11-201ENST00000560634 RCCD1A6NED2 376 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 CASKO14936 926 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 EPHB6O15197 1021 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 DNAJA2O60884 412 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 OR5F1O95221 314 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 PGK1P00558 417 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 TPSB2P20231 275 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 CTSKP43235 329 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 GNPDA1P46926 289 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 TPSAB1Q15661 275 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 FAM171BQ6P995 826 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 SLCO6A1Q86UG4 719 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 PEX5LQ8IYB4 626 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 GPR156Q8NFN8 814 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 PTCD2Q8WV60 388 aaKnown RBP13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 RERGQ96A58 199 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 C7orf26Q96N11 449 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 TTLL2Q9BWV7 592 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 TRMT13Q9NUP7 481 aaKnown RBP13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 PNPOQ9NVS9 261 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 EGFL7Q9UHF1 273 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 ADGRE2Q9UHX3 823 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 TMA7Q9Y2S6 64 aaKnown RBP13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 A0A0J9YYE9 177 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 LYNP07948 512 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 MNDAP41218 407 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 BUD31P41223 144 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 ZDHHC20Q5W0Z9 365 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 THAP5Q7Z6K1 395 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 KIAA0319LQ8IZA0 1049 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 DSELQ8IZU8 1212 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 BEND7Q8N7W2 519 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 FAM13CQ8NE31 585 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 DSN1Q9H410 356 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 ELL3Q9HB65 397 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 ZNF780BQ9Y6R6 833 aa13.21□□□□□ -0.3
CSPG4P11-201ENST00000560634 GTPBP1O00178 669 aaKnown RBP13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 CHST10O43529 356 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 SLC35G4P0C7Q5 338 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 ENPEPQ07075 957 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 PEX6Q13608 980 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 FAM46CQ5VWP2 391 aa13.2□□□□□ -0.3
CSPG4P11-201ENST00000560634 ZNF554Q86TJ5 538 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms