RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 OR1E3Q8WZA6 343 aa17.77■□□□□ 0.44
TPM1-218ENST00000559281 PDXPQ96GD0 296 aa17.77■□□□□ 0.44
TPM1-218ENST00000559281 CYP4F12Q9HCS2 524 aa17.77■□□□□ 0.44
TPM1-218ENST00000559281 FGF22Q9HCT0 170 aa17.77■□□□□ 0.44
TPM1-218ENST00000559281 THSD1Q9NS62 852 aa17.77■□□□□ 0.44
TPM1-218ENST00000559281 RBM22Q9NW64 420 aaKnown RBP eCLIP17.77■□□□□ 0.44
TPM1-218ENST00000559281 WDFY3Q8IZQ1 3526 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 TMX2-CTNND1H3BSU7 103 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 MFSD11O43934 449 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 MYCLP1P12525 358 aaPredicted RBP17.76■□□□□ 0.43
TPM1-218ENST00000559281 CCNB1P14635 433 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 GM2AP17900 193 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 ARHGAP25P42331 645 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 TAS2R40P59535 323 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 MESDQ14696 234 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 TCEA2Q15560 299 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 KYQ8NBH2 561 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 ZNF248Q8NDW4 579 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 PIH1D2Q8WWB5 315 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 MAML1Q92585 1016 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 DTD2Q96FN9 168 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 ZNF830Q96NB3 372 aaPredicted RBP17.76■□□□□ 0.43
TPM1-218ENST00000559281 MCCC1Q96RQ3 725 aaPredicted RBP17.76■□□□□ 0.43
TPM1-218ENST00000559281 LGR4Q9BXB1 951 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 PACSIN1Q9BY11 444 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 TEX101Q9BY14 249 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 SYNDIG1Q9H7V2 258 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 DNPEPQ9ULA0 475 aa17.76■□□□□ 0.43
TPM1-218ENST00000559281 PRSS38A1L453 326 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 GOLGA6CA6NDK9 693 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 GOLGA6BA6NDN3 693 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 NPIPB15A6NHN6 443 aaPredicted RBP17.75■□□□□ 0.43
TPM1-218ENST00000559281 GOLGA6DP0CG33 693 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 ITPKBP27987 946 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 TEAD1P28347 426 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 ETV3P41162 512 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 PCBP4P57723 403 aaKnown RBP17.75■□□□□ 0.43
TPM1-218ENST00000559281 PEX6Q13608 980 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 ODF2Q5BJF6 829 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 OGFOD3Q6PK18 319 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 IGF2-ASQ6U949 168 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 Q6ZVL8 140 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 HSD11B1LQ7Z5J1 315 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 VSTM4Q8IW00 320 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 RHOT2Q8IXI1 618 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 CCNYQ8ND76 341 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 GPR156Q8NFN8 814 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 SLC35G2Q8TBE7 412 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 KIAA1524Q8TCG1 905 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 FAF2Q96CS3 445 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 ATXN7L3BQ96GX2 97 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 LGMNQ99538 433 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 MAK16Q9BXY0 300 aaKnown RBP17.75■□□□□ 0.43
TPM1-218ENST00000559281 TMEM168Q9H0V1 697 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 DPEP2Q9H4A9 486 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 MRPL40Q9NQ50 206 aaKnown RBP17.75■□□□□ 0.43
TPM1-218ENST00000559281 ABHD10Q9NUJ1 306 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 GOLGA6AQ9NYA3 693 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 TTLL3Q9Y4R7 772 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 ENTPD2Q9Y5L3 495 aa17.75■□□□□ 0.43
TPM1-218ENST00000559281 NTN3O00634 580 aaPredicted RBP17.74■□□□□ 0.43
TPM1-218ENST00000559281 FZD6O60353 706 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 PYGLP06737 847 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 GLB1P16278 677 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 ZNF30P17039 623 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 CTPS1P17812 591 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 LHCGRP22888 699 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 KDELR1P24390 212 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 RPL26P61254 145 aaKnown RBP17.74■□□□□ 0.43
TPM1-218ENST00000559281 DPTQ07507 201 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 CCDC173Q0VFZ6 552 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 C3orf38Q5JPI3 329 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 ALG1LQ6GMV1 187 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 RAET1GQ6H3X3 334 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 HEATR4Q86WZ0 1026 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 ARL14Q8N4G2 192 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 WDR36Q8NI36 951 aaKnown RBP17.74■□□□□ 0.43
TPM1-218ENST00000559281 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.74■□□□□ 0.43
TPM1-218ENST00000559281 CCDC74AQ96AQ1 378 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 RNF157Q96PX1 679 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 GFM1Q96RP9 751 aaKnown RBP17.74■□□□□ 0.43
TPM1-218ENST00000559281 GSDMCQ9BYG8 508 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 NHEJ1Q9H9Q4 299 aaPredicted RBP17.74■□□□□ 0.43
TPM1-218ENST00000559281 CARS2Q9HA77 564 aaKnown RBP17.74■□□□□ 0.43
TPM1-218ENST00000559281 RPL26L1Q9UNX3 145 aaKnown RBP17.74■□□□□ 0.43
TPM1-218ENST00000559281 SATB2Q9UPW6 733 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 PCDHGA8Q9Y5G5 932 aa17.74■□□□□ 0.43
TPM1-218ENST00000559281 LRRD1A4D1F6 860 aa17.73■□□□□ 0.43
TPM1-218ENST00000559281 ZNF487B1APH4 448 aa17.73■□□□□ 0.43
TPM1-218ENST00000559281 MFAP3LO75121 409 aa17.73■□□□□ 0.43
TPM1-218ENST00000559281 MAP3K6O95382 1288 aa17.73■□□□□ 0.43
TPM1-218ENST00000559281 PDHA1P08559 390 aa17.73■□□□□ 0.43
TPM1-218ENST00000559281 PNLIPP16233 465 aa17.73■□□□□ 0.43
TPM1-218ENST00000559281 MLLT3P42568 568 aaPredicted RBP17.73■□□□□ 0.43
TPM1-218ENST00000559281 GPR1P46091 355 aa17.73■□□□□ 0.43
TPM1-218ENST00000559281 CDK3Q00526 305 aa17.73■□□□□ 0.43
TPM1-218ENST00000559281 DSC2Q02487 901 aa17.73■□□□□ 0.43
TPM1-218ENST00000559281 GBE1Q04446 702 aa17.73■□□□□ 0.43
TPM1-218ENST00000559281 ILF3Q12906 894 aaKnown RBP eCLIP17.73■□□□□ 0.43
TPM1-218ENST00000559281 BROXQ5VW32 411 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms