RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 CACNA2D4Q7Z3S7 1137 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 PIP4P1Q86T03 277 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 MIGA1Q8NAN2 632 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 OR1N1Q8NGS0 311 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 PRSS3P2Q8NHM4 247 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 ZNF398Q8TD17 642 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 DENND1AQ8TEH3 1009 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 STAMQ92783 540 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 FGF14Q92915 247 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 CUL5Q93034 780 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 RPL36ALQ969Q0 106 aaKnown RBP6.25□□□□□ -1.41
RTF1-204ENST00000558117 DYNLL2Q96FJ2 89 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 EIF3CQ99613 913 aaKnown RBP6.25□□□□□ -1.41
RTF1-204ENST00000558117 PRSS22Q9GZN4 317 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 TMEM9BQ9NQ34 198 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 SWAP70Q9UH65 585 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 FEM1BQ9UK73 627 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 MYH7BA7E2Y1 1941 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 KIAA1217Q5T5P2 1943 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 CLUHO75153 1309 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 SPENQ96T58 3664 aaKnown RBP6.24□□□□□ -1.41
RTF1-204ENST00000558117 OTOGQ6ZRI0 2925 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 ZMYM2Q9UBW7 1377 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 CYP2D7A0A087X1C5 515 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 CXCL14O95715 111 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 SCG2P13521 617 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 RDXP35241 583 aaKnown RBP6.24□□□□□ -1.41
RTF1-204ENST00000558117 GHRHRQ02643 423 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 PTK2BQ14289 1009 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 CSHL1Q14406 222 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 PFKFB3Q16875 520 aaPredicted RBP6.24□□□□□ -1.41
RTF1-204ENST00000558117 TMEM95Q3KNT9 176 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 FBXO47Q5MNV8 452 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 PGBD2Q6P3X8 592 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 PARM1Q6UWI2 310 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 WDR5BQ86VZ2 330 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 TMTC2Q8N394 836 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 CMASQ8NFW8 434 aaPredicted RBP6.24□□□□□ -1.41
RTF1-204ENST00000558117 ZNF778Q96MU6 729 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 SLC32A1Q9H598 525 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 F8P00451 2351 aa6.24□□□□□ -1.41
RTF1-204ENST00000558117 SPTBN1Q01082 2364 aaKnown RBP6.24□□□□□ -1.41
RTF1-204ENST00000558117 SPAG17Q6Q759 2223 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 PLXNB3Q9ULL4 1909 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 INO80B-WBP1J3KQ70 363 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 BCAR3O75815 825 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 CER1O95813 267 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 SLC3A2P08195 630 aaKnown RBP6.23□□□□□ -1.41
RTF1-204ENST00000558117 SMIM10L2AP0DMW4 78 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 SMIM10L2BP0DMW5 78 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 CD53P19397 219 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 MMP8P22894 467 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 BDNFP23560 247 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 DUSP1P28562 367 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 TACR3P29371 465 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 HOXA6P31267 233 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 PBX3P40426 434 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 ALDH18A1P54886 795 aaKnown RBP6.23□□□□□ -1.41
RTF1-204ENST00000558117 SSBP2P81877 361 aaPredicted RBP6.23□□□□□ -1.41
RTF1-204ENST00000558117 CALD1Q05682 793 aaKnown RBP6.23□□□□□ -1.41
RTF1-204ENST00000558117 RAPGEF1Q13905 1077 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 KPNB1Q14974 876 aaKnown RBP6.23□□□□□ -1.41
RTF1-204ENST00000558117 INO80DQ53TQ3 878 aaPredicted RBP6.23□□□□□ -1.41
RTF1-204ENST00000558117 ANO7Q6IWH7 933 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 RINT1Q6NUQ1 792 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 KYAT3Q6YP21 454 aaKnown RBP6.23□□□□□ -1.41
RTF1-204ENST00000558117 ATG16L2Q8NAA4 619 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 PPTC7Q8NI37 304 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 FAM71BQ8TC56 605 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 ADAMTS14Q8WXS8 1223 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 NAP1L4Q99733 375 aaKnown RBP6.23□□□□□ -1.41
RTF1-204ENST00000558117 C16orf70Q9BSU1 422 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 ELOVL1Q9BW60 279 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 C1QTNF7Q9BXJ2 289 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.23□□□□□ -1.41
RTF1-204ENST00000558117 ARL8BQ9NVJ2 186 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 HEMK1Q9Y5R4 338 aaPredicted RBP6.23□□□□□ -1.41
RTF1-204ENST00000558117 RPS6KL1Q9Y6S9 549 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 C2orf16Q68DN1 1984 aa6.23□□□□□ -1.41
RTF1-204ENST00000558117 M0QYT0 321 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 PRYO14603 147 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 RRHO14718 337 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 CAVIN2O95810 425 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 PEPDP12955 493 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 SFPQP23246 707 aaKnown RBP eCLIP6.22□□□□□ -1.41
RTF1-204ENST00000558117 CD52P31358 61 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 SETQ01105 290 aaPredicted RBP6.22□□□□□ -1.41
RTF1-204ENST00000558117 KLF9Q13886 244 aaPredicted RBP6.22□□□□□ -1.41
RTF1-204ENST00000558117 LY6DQ14210 128 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 DAZAP2Q15038 168 aaPredicted RBP6.22□□□□□ -1.41
RTF1-204ENST00000558117 GRAMD1BQ3KR37 738 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 ZACNQ401N2 412 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 CYP26C1Q6V0L0 522 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 TFAP2DQ7Z6R9 452 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 TTC30AQ86WT1 665 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 SPEM1Q8N4L4 309 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 OR52L2PQ8NGH6 319 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 NPIPB3Q92617 1050 aa6.22□□□□□ -1.41
RTF1-204ENST00000558117 AKAP1Q92667 903 aaKnown RBP eCLIP6.22□□□□□ -1.41
RTF1-204ENST00000558117 WBP1Q96G27 269 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms