RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 THOC5Q13769 683 aaKnown RBP12.42□□□□□ -0.42
TPM1-209ENST00000558072 CRYMQ14894 314 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 KYNUQ16719 465 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 TMEM52BQ4KMG9 183 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 MSS51Q4VC12 460 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 LGSNQ5TDP6 509 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 LYPLAL1Q5VWZ2 237 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 LRIG3Q6UXM1 1119 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 PARS2Q7L3T8 475 aaKnown RBP12.42□□□□□ -0.42
TPM1-209ENST00000558072 TAOK1Q7L7X3 1001 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 SDCCAG8Q86SQ7 713 aaPredicted RBP12.42□□□□□ -0.42
TPM1-209ENST00000558072 GSPT2Q8IYD1 628 aaKnown RBP12.42□□□□□ -0.42
TPM1-209ENST00000558072 MPP5Q8N3R9 675 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 HDDC3Q8N4P3 179 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 TSTD1Q8NFU3 115 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 CXorf40AQ8TE69 158 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 ZNF669Q96BR6 464 aaPredicted RBP12.42□□□□□ -0.42
TPM1-209ENST00000558072 CFAP36Q96G28 342 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 FAM167BQ9BTA0 163 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 SEMA4AQ9H3S1 761 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 SGK2Q9HBY8 427 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 LRRC4CQ9HCJ2 640 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 PREBQ9HCU5 417 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 PCDH12Q9NPG4 1184 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 CD93Q9NPY3 652 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 CHRAC1Q9NRG0 131 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 NLE1Q9NVX2 485 aaPredicted RBP12.42□□□□□ -0.42
TPM1-209ENST00000558072 FBXL12Q9NXK8 326 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 BCCIPQ9P287 314 aaKnown RBP eCLIP12.42□□□□□ -0.42
TPM1-209ENST00000558072 TXNDC16Q9P2K2 825 aa12.42□□□□□ -0.42
TPM1-209ENST00000558072 ANKRD36A6QL64 1941 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 TCRBV21S2A2A0A5A6 115 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 GOLGA6L10A6NI86 522 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 LRRC72A6NJI9 287 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 H7C0S8 307 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 AREL1O15033 823 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 MID1O15344 667 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 LDB2O43679 373 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 SLC34A2O95436 690 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 APBB3O95704 486 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 ELFN1P0C7U0 828 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 CTPS1P17812 591 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 HSD17B3P37058 310 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 MMP12P39900 470 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 P2RY2P41231 377 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 CXCL12P48061 93 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 ACVR1Q04771 509 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 MGAT5Q09328 741 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 MSLNQ13421 630 aaPredicted RBP12.41□□□□□ -0.42
TPM1-209ENST00000558072 OLIG2Q13516 323 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 TMEM31Q5JXX7 168 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 KIAA1161Q6NSJ0 714 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 MRNIPQ6NTE8 343 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 FBXO38Q6PIJ6 1188 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 AFTPHQ6ULP2 937 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 CRTC1Q6UUV9 634 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 TMEM92Q6UXU6 159 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 CERS6Q6ZMG9 384 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 UNC5AQ6ZN44 842 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 KIAA0408Q6ZU52 694 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 CYP2U1Q7Z449 544 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 NLRP8Q86W28 1048 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 PGBD3Q8N328 593 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 RIBC1Q8N443 379 aaPredicted RBP12.41□□□□□ -0.42
TPM1-209ENST00000558072 GOLGA6L1Q8N7Z2 621 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 FAM131CQ96AQ9 280 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 VOPP1Q96AW1 172 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 ARRDC3Q96B67 414 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 PWWP2AQ96N64 755 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 PLEKHG4BQ96PX9 1271 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 HHIPQ96QV1 700 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 TCF12Q99081 682 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 C11orf16Q9NQ32 467 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 TREX1Q9NSU2 369 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 IL17CQ9P0M4 197 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 NFKBIL1Q9UBC1 381 aaPredicted RBP12.41□□□□□ -0.42
TPM1-209ENST00000558072 B4GALT6Q9UBX8 382 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 SARDHQ9UL12 918 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.41□□□□□ -0.42
TPM1-209ENST00000558072 SLC30A1Q9Y6M5 507 aa12.41□□□□□ -0.42
TPM1-209ENST00000558072 KMT2EQ8IZD2 1858 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 TCEA3O75764 348 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 RNASEH2AO75792 299 aaKnown RBP12.4□□□□□ -0.42
TPM1-209ENST00000558072 ACSL3O95573 720 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 CNTFP26441 200 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 ATP5DP30049 168 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 SPAM1P38567 509 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 PXNP49023 591 aaPredicted RBP12.4□□□□□ -0.42
TPM1-209ENST00000558072 ZNF140P52738 457 aaPredicted RBP12.4□□□□□ -0.42
TPM1-209ENST00000558072 STC1P52823 247 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 DCDC1P59894 354 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 RPS21P63220 83 aaKnown RBP12.4□□□□□ -0.42
TPM1-209ENST00000558072 CNTN1Q12860 1018 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 ITGA9Q13797 1035 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 SLC29A2Q14542 456 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 CASP8Q14790 479 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 MAP7D1Q3KQU3 841 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 GPR33Q49SQ1 333 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 RNF187Q5TA31 235 aaPredicted RBP12.4□□□□□ -0.42
TPM1-209ENST00000558072 LRRC66Q68CR7 880 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms