RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CCDC38Q502W7 563 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 KIAA1161Q6NSJ0 714 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 HIBCHQ6NVY1 386 aaPredicted RBP15.29■□□□□ 0.04
NEDD1-213ENST00000557644 GLT6D1Q7Z4J2 308 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 CBARPQ8N350 705 aaPredicted RBP15.29■□□□□ 0.04
NEDD1-213ENST00000557644 SERPINB12Q96P63 405 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 PRRX2Q99811 253 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 MYOCQ99972 504 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 SLC17A9Q9BYT1 436 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 GPR63Q9BZJ6 419 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 RAB17Q9H0T7 212 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 FAM86C1Q9NVL1 165 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 GRHL1Q9NZI5 618 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 KCTD3Q9Y597 815 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 LATO43561 262 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 TM7SF2O76062 418 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 RECQL5O94762 991 aaPredicted RBP15.28■□□□□ 0.04
NEDD1-213ENST00000557644 STC1P52823 247 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 ACOX1Q15067 660 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 LRRC8BQ6P9F7 803 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 KDM7AQ6ZMT4 941 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 Q6ZVL8 140 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 PCGF5Q86SE9 256 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 TTC30BQ8N4P2 665 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 ORAI3Q9BRQ5 295 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 C1QTNF2Q9BXJ5 285 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 BPIFA1Q9NP55 256 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 CD84Q9UIB8 345 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 CCDC78A2IDD5 438 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 RAD51BO15315 384 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 LZTS3O60299 673 aaPredicted RBP15.28■□□□□ 0.04
NEDD1-213ENST00000557644 RHOXF2BP0C7M4 288 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 ZNF30P17039 623 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 DHPSP49366 369 aaPredicted RBP15.28■□□□□ 0.04
NEDD1-213ENST00000557644 CCR5P51681 352 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 MORF4L2Q15014 288 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 TMC3Q7Z5M5 1100 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 MCUQ8NE86 351 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 BRSK1Q8TDC3 778 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 COQ10AQ96MF6 247 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 RHOXF2Q9BQY4 288 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.28■□□□□ 0.04
NEDD1-213ENST00000557644 EIF2B4Q9UI10 523 aaKnown RBP15.28■□□□□ 0.04
NEDD1-213ENST00000557644 ANAPC5Q9UJX4 755 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 CA5BQ9Y2D0 317 aa15.28■□□□□ 0.04
NEDD1-213ENST00000557644 THADAQ6YHU6 1953 aa15.27■□□□□ 0.04
NEDD1-213ENST00000557644 MEI4A8MW99 385 aa15.27■□□□□ 0.04
NEDD1-213ENST00000557644 ITPKAP23677 461 aa15.27■□□□□ 0.04
NEDD1-213ENST00000557644 MGAT1P26572 445 aa15.27■□□□□ 0.04
NEDD1-213ENST00000557644 SGCGQ13326 291 aa15.27■□□□□ 0.04
NEDD1-213ENST00000557644 SEPT6Q14141 434 aa15.27■□□□□ 0.04
NEDD1-213ENST00000557644 HOOK3Q86VS8 718 aa15.27■□□□□ 0.04
NEDD1-213ENST00000557644 AGGF1Q8N302 714 aaeCLIP15.27■□□□□ 0.04
NEDD1-213ENST00000557644 MPP5Q8N3R9 675 aa15.27■□□□□ 0.04
NEDD1-213ENST00000557644 ZC3H10Q96K80 434 aaKnown RBP15.27■□□□□ 0.04
NEDD1-213ENST00000557644 EPB41L5Q9HCM4 733 aa15.27■□□□□ 0.04
NEDD1-213ENST00000557644 LRRK1Q38SD2 2015 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 WNT9AO14904 365 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 LDB2O43679 373 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 BANF1O75531 89 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 HMGCLP35914 325 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 SARNPP82979 210 aaKnown RBP15.27■□□□□ 0.03
NEDD1-213ENST00000557644 ELF2Q15723 593 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 GLE1Q53GS7 698 aaKnown RBP15.27■□□□□ 0.03
NEDD1-213ENST00000557644 TEX35Q5T0J7 233 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 FNBP1LQ5T0N5 605 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 ZC3H14Q6PJT7 736 aaKnown RBP15.27■□□□□ 0.03
NEDD1-213ENST00000557644 MICALCLQ6ZW33 695 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 TECPR1Q7Z6L1 1165 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 C11orf74Q86VG3 221 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 PELI3Q8N2H9 469 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 ATOH1Q92858 354 aaPredicted RBP15.27■□□□□ 0.03
NEDD1-213ENST00000557644 FOXJ1Q92949 421 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 KLF6Q99612 283 aaPredicted RBP15.27■□□□□ 0.03
NEDD1-213ENST00000557644 MIR1-1HGQ9H1L0 117 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 PCED1AQ9H1Q7 454 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 TRABDQ9H4I3 376 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 MBNL1Q9NR56 388 aaKnown RBP15.27■□□□□ 0.03
NEDD1-213ENST00000557644 SYBUQ9NX95 663 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 HACD3Q9P035 362 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 WHRNQ9P202 907 aa15.27■□□□□ 0.03
NEDD1-213ENST00000557644 ATXN2Q99700 1313 aaKnown RBP15.27■□□□□ 0.03
NEDD1-213ENST00000557644 SPAG17Q6Q759 2223 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 SPINT3P49223 89 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 CALCOCO2Q13137 446 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 TAF1AQ15573 450 aaPredicted RBP15.26■□□□□ 0.03
NEDD1-213ENST00000557644 MSS51Q4VC12 460 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 RGL4Q8IZJ4 473 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 SEC14L1Q92503 715 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 SCAMP4Q969E2 229 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 ZNF778Q96MU6 729 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 TRIM56Q9BRZ2 755 aaKnown RBP15.26■□□□□ 0.03
NEDD1-213ENST00000557644 IL17CQ9P0M4 197 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 FNDC3AQ9Y2H6 1198 aaKnown RBP15.26■□□□□ 0.03
NEDD1-213ENST00000557644 FANCMQ8IYD8 2048 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 MYLKQ15746 1914 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 A0A1W2PPC4 97 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 BHMG1C9JSJ3 638 aaPredicted RBP15.26■□□□□ 0.03
NEDD1-213ENST00000557644 PSMD11O00231 422 aa15.26■□□□□ 0.03
NEDD1-213ENST00000557644 CCL22O00626 93 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms