RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 OLFM3Q96PB7 478 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 RBM15Q96T37 977 aaKnown RBP eCLIP13.04□□□□□ -0.32
NPAS3-209ENST00000551008 LGMNQ99538 433 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 IL12RB2Q99665 862 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 TDRD1Q9BXT4 1180 aaKnown RBP13.04□□□□□ -0.32
NPAS3-209ENST00000551008 SLC13A1Q9BZW2 595 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 NRSN2Q9GZP1 204 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 GOLPH3Q9H4A6 298 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 DEF6Q9H4E7 631 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 KLQ9UEF7 1012 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 PHTF1Q9UMS5 762 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 ST14Q9Y5Y6 855 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 A0A087WV48 116 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 A0A1W2PQ67 120 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 CPED1A4D0V7 1026 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 LRRD1A4D1F6 860 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 AKR1B15C9JRZ8 316 aaPredicted RBP13.03□□□□□ -0.32
NPAS3-209ENST00000551008 KCNK1O00180 336 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 LCA5LO95447 670 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 CCNB1P14635 433 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 NR0B2Q15466 257 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 TAZQ16635 292 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 COL28A1Q2UY09 1125 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 ARMC12Q5T9G4 340 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 RD3Q7Z3Z2 195 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.03□□□□□ -0.32
NPAS3-209ENST00000551008 OR56A4Q8NGH8 313 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 NUS1Q96E22 293 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 CCDC42Q96M95 316 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 WDR24Q96S15 920 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 TEX101Q9BY14 249 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 FRMD8Q9BZ67 464 aaPredicted RBP13.03□□□□□ -0.32
NPAS3-209ENST00000551008 POLR1EQ9GZS1 481 aaKnown RBP13.03□□□□□ -0.32
NPAS3-209ENST00000551008 RBM22Q9NW64 420 aaKnown RBP eCLIP13.03□□□□□ -0.32
NPAS3-209ENST00000551008 ZNHIT6Q9NWK9 470 aaKnown RBP13.03□□□□□ -0.32
NPAS3-209ENST00000551008 BPTFQ12830 3046 aa13.03□□□□□ -0.32
NPAS3-209ENST00000551008 A0A0J9YYE9 177 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 PSMD11O00231 422 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 NOBOXO60393 691 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 BRINP1O60477 761 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 CSO75390 466 aaKnown RBP13.02□□□□□ -0.33
NPAS3-209ENST00000551008 TRBC1P01850 177 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 CEACAM5P06731 702 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 ANXA6P08133 673 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 HOXB3P14651 431 aaPredicted RBP13.02□□□□□ -0.33
NPAS3-209ENST00000551008 FECHP22830 423 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 ARHGAP25P42331 645 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 MARCKSL1P49006 195 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 DUSP3P51452 185 aaPredicted RBP13.02□□□□□ -0.33
NPAS3-209ENST00000551008 STC1P52823 247 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 HADHBP55084 474 aaKnown RBP13.02□□□□□ -0.33
NPAS3-209ENST00000551008 IFI35P80217 286 aaPredicted RBP13.02□□□□□ -0.33
NPAS3-209ENST00000551008 SKOR1P84550 965 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 PTSQ03393 145 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 ADCY2Q08462 1091 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 PPIDQ08752 370 aaKnown RBP13.02□□□□□ -0.33
NPAS3-209ENST00000551008 HS1BP3Q53T59 392 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 LRRC38Q5VT99 294 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 LRRC66Q68CR7 880 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 DENND2CQ68D51 928 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 TIGD7Q6NT04 549 aaPredicted RBP13.02□□□□□ -0.33
NPAS3-209ENST00000551008 MFSD7Q6UXD7 560 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 B4GALNT4Q76KP1 1039 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 HEATR4Q86WZ0 1026 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 VSIG1Q86XK7 387 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 NRROSQ86YC3 692 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 CNGA4Q8IV77 575 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 RHOT2Q8IXI1 618 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 CCDC13Q8IYE1 715 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 BBS5Q8N3I7 341 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 FSTL5Q8N475 847 aaPredicted RBP13.02□□□□□ -0.33
NPAS3-209ENST00000551008 GPR156Q8NFN8 814 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 MAPK15Q8TD08 544 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 PRR11Q96HE9 360 aaPredicted RBP13.02□□□□□ -0.33
NPAS3-209ENST00000551008 AGAP2Q99490 1192 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 CEP41Q9BYV8 373 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 BRD8Q9H0E9 1235 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 TMEM168Q9H0V1 697 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 RBSNQ9H1K0 784 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 ABCG8Q9H221 673 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 WDR26Q9H7D7 661 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 AMACRQ9UHK6 382 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 LCMT1Q9UIC8 334 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 INTUQ9ULD6 942 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 LHX6Q9UPM6 363 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 CHKBQ9Y259 395 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 ENTPD2Q9Y5L3 495 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 MGAQ8IWI9 3026 aa13.02□□□□□ -0.33
NPAS3-209ENST00000551008 AHCTF1Q8WYP5 2266 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 PRSS38A1L453 326 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 RCCD1A6NED2 376 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 CAPN8A6NHC0 703 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 CACNB4O00305 520 aaPredicted RBP13.01□□□□□ -0.33
NPAS3-209ENST00000551008 NTN3O00634 580 aaPredicted RBP13.01□□□□□ -0.33
NPAS3-209ENST00000551008 TNFRSF10CO14798 259 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 JCHAINP01591 159 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 KRT1P04264 644 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 CYP2A6P11509 494 aaPredicted RBP13.01□□□□□ -0.33
NPAS3-209ENST00000551008 MYCLP1P12525 358 aaPredicted RBP13.01□□□□□ -0.33
NPAS3-209ENST00000551008 COMTP21964 271 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms