RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 CAPN13Q6MZZ7 669 aaPredicted RBP9.02□□□□□ -0.96
NECAP1-207ENST00000544891 MZT2BQ6NZ67 158 aa9.02□□□□□ -0.96
NECAP1-207ENST00000544891 C16orf59Q7L2K0 433 aa9.02□□□□□ -0.96
NECAP1-207ENST00000544891 GET4Q7L5D6 327 aaPredicted RBP9.02□□□□□ -0.96
NECAP1-207ENST00000544891 SLC41A1Q8IVJ1 513 aa9.02□□□□□ -0.96
NECAP1-207ENST00000544891 OR8H2Q8N162 312 aa9.02□□□□□ -0.96
NECAP1-207ENST00000544891 ZNF248Q8NDW4 579 aa9.02□□□□□ -0.96
NECAP1-207ENST00000544891 RERGQ96A58 199 aaPredicted RBP9.02□□□□□ -0.96
NECAP1-207ENST00000544891 MIEF2Q96C03 454 aa9.02□□□□□ -0.96
NECAP1-207ENST00000544891 FBXO6Q9NRD1 293 aaPredicted RBP9.02□□□□□ -0.96
NECAP1-207ENST00000544891 SLC12A4Q9UP95 1085 aa9.02□□□□□ -0.96
NECAP1-207ENST00000544891 TSC22D4Q9Y3Q8 395 aa9.02□□□□□ -0.96
NECAP1-207ENST00000544891 MAFBQ9Y5Q3 323 aaPredicted RBP9.02□□□□□ -0.96
NECAP1-207ENST00000544891 ADAMTSL1Q8N6G6 1762 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 MGRN1O60291 552 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 CBX6O95503 412 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 EOMESO95936 686 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 MMP3P08254 477 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 PRDX6P30041 224 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 PBX3P40426 434 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 PKNOX1P55347 436 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 ELF3P78545 371 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 GRIK5Q16478 980 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 PPP1R26Q5T8A7 1209 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 DNAJB8Q8NHS0 232 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 C7orf26Q96N11 449 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 RTKNQ9BST9 563 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 RHOBTB2Q9BYZ6 727 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 SENP6Q9GZR1 1112 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 SLC25A51Q9H1U9 297 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 SEMA3GQ9NS98 782 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 XPR1Q9UBH6 696 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 LRRC14BA6NHZ5 514 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 YDJCA8MPS7 323 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 AP3D1O14617 1153 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 DRD4P21917 467 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 GSTM5P46439 218 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 RPL5P46777 297 aaKnown RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 NDST2P52849 883 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 RPL7AP62424 266 aaKnown RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 COX10Q12887 443 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 IL17AQ16552 155 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 PTPN20Q4JDL3 420 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 C16orf46Q6P387 395 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 CLVS1Q8IUQ0 354 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 DENND1CQ8IV53 801 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 SLAIN1Q8ND83 568 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 MYO19Q96H55 970 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 DNAJC1Q96KC8 554 aaKnown RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 QKIQ96PU8 341 aaKnown RBP eCLIP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 CSPG4P5Q96PW8 444 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 PNPLA3Q9NST1 481 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 SAMD4AQ9UPU9 718 aaKnown RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 COQ4Q9Y3A0 265 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 SIPA1L1O43166 1804 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 DHX15O43143 795 aaKnown RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 PRNPP04156 253 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 TNFSF9P41273 254 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 RPS6KA3P51812 740 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 CHN2P52757 468 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 PSMD4P55036 377 aaKnown RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 ACTR3P61158 418 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 ITGA7Q13683 1181 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 DPYSQ14117 519 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 TTMPQ5BVD1 217 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 MTX3Q5HYI7 312 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 NOL9Q5SY16 702 aaKnown RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 ZCCHC23Q6ZST2 131 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 DHDDSQ86SQ9 333 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 SAMD14Q8IZD0 417 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 ENKURQ8TC29 256 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 S100A13Q99584 98 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 TBC1D10AQ9BXI6 508 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 SPRTNQ9H040 489 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-207ENST00000544891 NUAK2Q9H093 628 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 CDH19Q9H159 772 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 ARMCX1Q9P291 453 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 FBXL21Q9UKT6 434 aa9.02□□□□□ -0.97
NECAP1-207ENST00000544891 CNTNAP1P78357 1384 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 MOXD2PA6NHM9 499 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 EPHB6O15197 1021 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 NDUFS2O75306 463 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 PAGE1O75459 146 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 SASH3O75995 380 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 GJB6O95452 261 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 FEN1P39748 380 aaKnown RBP9.01□□□□□ -0.97
NECAP1-207ENST00000544891 CXCR3P49682 368 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 UGT2B15P54855 530 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 PFKPQ01813 784 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 DCTN2Q13561 401 aaKnown RBP9.01□□□□□ -0.97
NECAP1-207ENST00000544891 HNRNPDQ14103 355 aaKnown RBP9.01□□□□□ -0.97
NECAP1-207ENST00000544891 ZNF618Q5T7W0 954 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 NAIF1Q69YI7 327 aaPredicted RBP9.01□□□□□ -0.97
NECAP1-207ENST00000544891 RD3Q7Z3Z2 195 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 PEG10Q86TG7 708 aaKnown RBP9.01□□□□□ -0.97
NECAP1-207ENST00000544891 RASAL3Q86YV0 1011 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 BHLHE22Q8NFJ8 381 aaPredicted RBP9.01□□□□□ -0.97
NECAP1-207ENST00000544891 ADCY4Q8NFM4 1077 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 HDAC10Q969S8 669 aa9.01□□□□□ -0.97
NECAP1-207ENST00000544891 KREMEN1Q96MU8 473 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms