RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 TET1Q8NFU7 2136 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 SCN8AQ9UQD0 1980 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.88□□□□□ -0.83
SS18-205ENST00000542420 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.88□□□□□ -0.83
SS18-205ENST00000542420 TBKBP1A7MCY6 615 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 E9PBE3 544 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 H0Y3Z8 333 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 KLHL41O60662 606 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 FKTNO75072 461 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 VPS4BO75351 444 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 CCDC166P0CW27 439 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 PFKLP17858 780 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 ACVRL1P37023 503 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 ACADVLP49748 655 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 MAXP61244 160 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 SLC25A3Q00325 362 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 CREMQ03060 361 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 SULT2A1Q06520 285 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 STX5Q13190 355 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 ZNF177Q13360 481 aaPredicted RBP9.88□□□□□ -0.83
SS18-205ENST00000542420 AARS2Q5JTZ9 985 aaKnown RBP9.88□□□□□ -0.83
SS18-205ENST00000542420 ADGRF1Q5T601 910 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 C1orf53Q5VUE5 145 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 ANKRD33Q7Z3H0 272 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 PHTF2Q8N3S3 785 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 RIN3Q8TB24 985 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 FAM136AQ96C01 138 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 TOX2Q96NM4 488 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 LENG8Q96PV6 779 aaPredicted RBP9.88□□□□□ -0.83
SS18-205ENST00000542420 KLF16Q9BXK1 252 aaPredicted RBP9.88□□□□□ -0.83
SS18-205ENST00000542420 TDRD1Q9BXT4 1180 aaKnown RBP9.88□□□□□ -0.83
SS18-205ENST00000542420 DERL2Q9GZP9 239 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 ATXN3LQ9H3M9 355 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 SLC27A5Q9Y2P5 690 aa9.88□□□□□ -0.83
SS18-205ENST00000542420 HELZP42694 1942 aaKnown RBP9.88□□□□□ -0.83
SS18-205ENST00000542420 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.87□□□□□ -0.83
SS18-205ENST00000542420 C2orf81A6NN90 581 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 PDLIM1O00151 329 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 GOT2P00505 430 aaKnown RBP9.87□□□□□ -0.83
SS18-205ENST00000542420 SOD2P04179 222 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 RHOCP08134 193 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 CD1DP15813 335 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 HMGA1P17096 107 aaKnown RBP9.87□□□□□ -0.83
SS18-205ENST00000542420 SAT1P21673 171 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 SLC6A4P31645 630 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 GLRBP48167 497 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 ALDH7A1P49419 539 aaKnown RBP9.87□□□□□ -0.83
SS18-205ENST00000542420 HERVK_113P63132 956 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 DSG1Q02413 1049 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 KLC1Q07866 573 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 PLD1Q13393 1074 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 IHHQ14623 411 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 VEPH1Q14D04 833 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 ZNF678Q5SXM1 525 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 TXNDC11Q6PKC3 985 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 BNC2Q6ZN30 1099 aaPredicted RBP9.87□□□□□ -0.83
SS18-205ENST00000542420 ISCA2Q86U28 154 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 CUZD1Q86UP6 607 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 DEFB107AQ8IZN7 70 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 NKAPQ8N5F7 415 aaKnown RBP9.87□□□□□ -0.83
SS18-205ENST00000542420 CATSPER1Q8NEC5 780 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 OR6P1Q8NGX9 317 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 ZNF461Q8TAF7 563 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 CDKN2AIPNLQ96HQ2 116 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 IGSF21Q96ID5 467 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 ERVK-6Q9BXR3 956 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 OSBPL1AQ9BXW6 950 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 ADGRE3Q9BY15 652 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 GSTO2Q9H4Y5 243 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 C6orf203Q9P0P8 240 aaPredicted RBP9.87□□□□□ -0.83
SS18-205ENST00000542420 POMPQ9Y244 141 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 ZFP37Q9Y6Q3 630 aaPredicted RBP9.87□□□□□ -0.83
SS18-205ENST00000542420 E2F8A0AVK6 867 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 LCHNA4D1U4 455 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 GOLGA8CPA6NN73 597 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 SYCE1LA8MT33 242 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 BBIP1A8MTZ0 92 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 STX16-NPEPL1H3BU86 382 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 STX16O14662 325 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 AOC2O75106 756 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 STC2O76061 302 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 ZNF37AP17032 561 aaPredicted RBP9.87□□□□□ -0.83
SS18-205ENST00000542420 GMPRP36959 345 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 ARSDP51689 593 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 ARPP19P56211 112 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 GRIK2Q13002 908 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 PTK2BQ14289 1009 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 ANO7Q6IWH7 933 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 PTAR1Q7Z6K3 402 aaPredicted RBP9.87□□□□□ -0.83
SS18-205ENST00000542420 DHDDSQ86SQ9 333 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 KBTBD6Q86V97 674 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 FAM217AQ8IXS0 508 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 STK40Q8N2I9 435 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 KCNV2Q8TDN2 545 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 TSPEARQ8WU66 669 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 NRG4Q8WWG1 115 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 KIAA1191Q96A73 305 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 TBATAQ96M53 351 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 CCT7Q99832 543 aa9.87□□□□□ -0.83
SS18-205ENST00000542420 NUF2Q9BZD4 464 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms