RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-219	ENST00000541341	TMED5	Q9Y3A6	229 aa		10.45	□□□□□ -0.74
CHFR-219	ENST00000541341	DNAH14	Q0VDD8	3507 aa		10.45	□□□□□ -0.74
CHFR-219	ENST00000541341	PTPRZ1	P23471	2315 aa	Predicted RBP	10.44	□□□□□ -0.74
CHFR-219	ENST00000541341		A0A087X1B8	175 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	LOC100653049	A0A140TA62	436 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341		A0A1B0GVG6	124 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	FAM170A	A1A519	330 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	MEI4	A8MW99	385 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	ADAM12	O43184	909 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	AVIL	O75366	819 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	E2F6	O75461	281 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	KRT34	O76011	436 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	EFEMP2	O95967	443 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	GSR	P00390	522 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	CST3	P01034	146 aa	Predicted RBP	10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	ALOX5	P09917	674 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	UMPS	P11172	480 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	SRF	P11831	508 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	LAMP2	P13473	410 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	ETS2	P15036	469 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	CD72	P21854	359 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	KCNA4	P22459	653 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	FSHR	P23945	695 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	TKT	P29401	623 aa	Known RBP	10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	TKTL1	P51854	596 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	DNAJB13	P59910	316 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	MYBPC1	Q00872	1141 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	SOX4	Q06945	474 aa	Predicted RBP	10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	FOXM1	Q08050	763 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	EPS8	Q12929	822 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	CBX3	Q13185	183 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	MOG	Q16653	247 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	FAM171A1	Q5VUB5	890 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	FAM45BP	Q6NSW5	357 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	SCYL2	Q6P3W7	929 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	FBXL19	Q6PCT2	694 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	PARM1	Q6UWI2	310 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	TMEM110	Q86TL2	294 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	CARM1	Q86X55	608 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	SNX32	Q86XE0	403 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	POU5F2	Q8N7G0	328 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	C1orf127	Q8N9H9	656 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	FAM45A	Q8TCE6	357 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	DQX1	Q8TE96	717 aa	Known RBP	10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	ING5	Q8WYH8	240 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	FGF14	Q92915	247 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	KIF12	Q96FN5	646 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	SLC45A3	Q96JT2	553 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	CYP2S1	Q96SQ9	504 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	TCF12	Q99081	682 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	KXD1	Q9BQD3	176 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	TMEM79	Q9BSE2	394 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	RHOBTB2	Q9BYZ6	727 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	PRKD2	Q9BZL6	878 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	UNK	Q9C0B0	810 aa	Known RBP	10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	C10orf88	Q9H8K7	445 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	SNX15	Q9NRS6	342 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	PNPO	Q9NVS9	261 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	HCFC1R1	Q9NWW0	138 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	HSFX1	Q9UBD0	423 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	WNT16	Q9UBV4	365 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	EMCN	Q9ULC0	261 aa		10.44	□□□□□ -0.74
CHFR-219	ENST00000541341	PTPRD	P23468	1912 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341		A0A096LPK6	155 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	HMX2	A2RU54	273 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	C16orf96	A6NNT2	1141 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	TMEM189-UBE2V1	I3L0A0	370 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	PIR	O00625	290 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	KPNA4	O00629	521 aa	Predicted RBP	10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	FAM163B	P0C2L3	166 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	GLUL	P15104	373 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	ATP6V1B1	P15313	513 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	PAM	P19021	973 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	PAX3	P23760	479 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	RPL9	P32969	192 aa	Known RBP	10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	HCAR3	P49019	387 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	TMBIM6	P55061	237 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	STX1B	P61266	288 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	MRPS22	P82650	360 aa	Known RBP	10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	HTR4	Q13639	388 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	COQ5	Q5HYK3	327 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	GLRA4	Q5JXX5	417 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	NAPEPLD	Q6IQ20	393 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	NIPAL1	Q6NVV3	410 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	IYD	Q6PHW0	289 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	TTC33	Q6PID6	262 aa	Predicted RBP	10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	ELMSAN1	Q6PJG2	1045 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	DCLRE1A	Q6PJP8	1040 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	ZBTB49	Q6ZSB9	765 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	SLC26A9	Q7LBE3	791 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	CLEC14A	Q86T13	490 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	SLC22A9	Q8IVM8	553 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	SIX6OS1	Q8N1H7	587 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	PQLC3	Q8N755	202 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	TMEM102	Q8N9M5	508 aa	Predicted RBP	10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	HIPK4	Q8NE63	616 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	BEST2	Q8NFU1	509 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	PCDH19	Q8TAB3	1148 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	ITFG1	Q8TB96	612 aa		10.43	□□□□□ -0.74
CHFR-219	ENST00000541341	CENPI	Q92674	756 aa	Predicted RBP	10.43	□□□□□ -0.74

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