RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CTBP1Q13363 440 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 PDE1CQ14123 709 aaPredicted RBP16.91■□□□□ 0.3
COPS3-212ENST00000539941 MYLK3Q32MK0 819 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 CARD16Q5EG05 197 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 CES5AQ6NT32 575 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 LCA5Q86VQ0 697 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 CAMK1DQ8IU85 385 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 CILP2Q8IUL8 1156 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 PIH1D2Q8WWB5 315 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 ASIC4Q96FT7 647 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 TBATAQ96M53 351 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 FAM83CQ9BQN1 747 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 APOL5Q9BWW9 433 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 SLC13A1Q9BZW2 595 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 TNKS2Q9H2K2 1166 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 ZFP14Q9HCL3 533 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 ERVW-1Q9UQF0 538 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 TTC36A6NLP5 189 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 ATP6V1G2O95670 118 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 POP4O95707 220 aaKnown RBP16.91■□□□□ 0.3
COPS3-212ENST00000539941 SRPRAP08240 638 aaKnown RBP16.91■□□□□ 0.3
COPS3-212ENST00000539941 OGNP20774 298 aaKnown RBP16.91■□□□□ 0.3
COPS3-212ENST00000539941 DRD4P21917 467 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 NNMTP40261 264 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 CSRP3P50461 194 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 MPP1Q00013 466 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 DLG2Q15700 870 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 CAPRIN2Q6IMN6 1127 aaKnown RBP16.91■□□□□ 0.3
COPS3-212ENST00000539941 MRNIPQ6NTE8 343 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 CPLX4Q7Z7G2 160 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 ETFBKMTQ8IXQ9 262 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 TTC30BQ8N4P2 665 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 NAT16Q8N8M0 369 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 MDGA1Q8NFP4 955 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 SPDL1Q96EA4 605 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 CDKN2AIPNLQ96HQ2 116 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 FAM111AQ96PZ2 611 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 COL25A1Q9BXS0 654 aaPredicted RBP16.91■□□□□ 0.3
COPS3-212ENST00000539941 RABEP2Q9H5N1 569 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 SLC8A2Q9UPR5 921 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 ANKRD6Q9Y2G4 727 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 C15orf41Q9Y2V0 281 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 CUL9Q8IWT3 2517 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 TCP11X1B4DZS4 312 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 WASH3PC4AMC7 463 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 ATP5BP06576 529 aaKnown RBP16.9■□□□□ 0.3
COPS3-212ENST00000539941 VIMP08670 466 aaKnown RBP16.9■□□□□ 0.3
COPS3-212ENST00000539941 TAC1P20366 129 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 CLCN5P51795 746 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 FCHO2Q0JRZ9 810 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 DBN1Q16643 649 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 GEN1Q17RS7 908 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 GKAP1Q5VSY0 366 aaPredicted RBP16.9■□□□□ 0.3
COPS3-212ENST00000539941 TMEM215Q68D42 235 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 TRIM68Q6AZZ1 485 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 AFTPHQ6ULP2 937 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 CDHR3Q6ZTQ4 885 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 PTAR1Q7Z6K3 402 aaPredicted RBP16.9■□□□□ 0.3
COPS3-212ENST00000539941 LRRC34Q8IZ02 419 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 RYBPQ8N488 228 aaPredicted RBP16.9■□□□□ 0.3
COPS3-212ENST00000539941 OR13C4Q8NGS5 318 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 OR4L1Q8NH43 312 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 ATXN7L3BQ96GX2 97 aa16.9■□□□□ 0.3
COPS3-212ENST00000539941 ZNF641Q96N77 438 aaPredicted RBP16.9■□□□□ 0.3
COPS3-212ENST00000539941 NOP53Q9NZM5 478 aaKnown RBP16.9■□□□□ 0.3
COPS3-212ENST00000539941 PRRC2BQ5JSZ5 2229 aaKnown RBP16.89■□□□□ 0.29
COPS3-212ENST00000539941 XIRP2A4UGR9 3374 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 A0A0J9YYE9 177 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 FAM95CA0A1B0GW59 222 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 CCDC162PA2VCL2 907 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 CD3EAPO15446 510 aaKnown RBP16.89■□□□□ 0.29
COPS3-212ENST00000539941 TULP3O75386 442 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 PIGNO95427 931 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 GOT2P00505 430 aaKnown RBP16.89■□□□□ 0.29
COPS3-212ENST00000539941 TRBC1P01850 177 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 FESP07332 822 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 ARSAP15289 507 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 FOXN2P32314 431 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 RECQLP46063 649 aaPredicted RBP16.89■□□□□ 0.29
COPS3-212ENST00000539941 POU4F1Q01851 419 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 ACCSLQ4AC99 568 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 SDCCAG8Q86SQ7 713 aaPredicted RBP16.89■□□□□ 0.29
COPS3-212ENST00000539941 MFSD6LQ8IWD5 586 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 OR4K2Q8NGD2 314 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 OR6K2Q8NGY2 324 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 LRRC8CQ8TDW0 803 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 ECHDC3Q96DC8 303 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 RIPOR3Q96MK2 946 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 S1PR5Q9H228 398 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 ECT2Q9H8V3 914 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 CATSPERZQ9NTU4 200 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 SLCO3A1Q9UIG8 710 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 SLC39A10Q9ULF5 831 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 ZNF711Q9Y462 761 aa16.89■□□□□ 0.29
COPS3-212ENST00000539941 A0A096LPK6 155 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 H7C0S8 307 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 AURKAO14965 403 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 STX7O15400 261 aaKnown RBP16.88■□□□□ 0.29
COPS3-212ENST00000539941 DLDP09622 509 aaKnown RBP16.88■□□□□ 0.29
COPS3-212ENST00000539941 CRABP2P29373 138 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms