RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 MGME1Q9BQP7 344 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 DDA1Q9BW61 102 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 LGR4Q9BXB1 951 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 TMEM168Q9H0V1 697 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 FANCLQ9NW38 375 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 GEMIN8Q9NWZ8 242 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 AIPL1Q9NZN9 384 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 AP4E1Q9UPM8 1137 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 COQ6Q9Y2Z9 468 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 PCDHGA4Q9Y5G9 962 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 RELNP78509 3460 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 SDK2Q58EX2 2172 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 B4E171 279 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 EEF2KO00418 725 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 PES1O00541 588 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 CAPN5O15484 640 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 FZD6O60353 706 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 HEXIM1O94992 359 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 PYGLP06737 847 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 CD1CP29017 333 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 TSPAN7P41732 249 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 PRKCIP41743 596 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 LIMK2P53671 638 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 MYL5Q02045 173 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 LRP8Q14114 963 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 NCAPHQ15003 741 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 BOLA3Q53S33 107 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 TMEM164Q5U3C3 297 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 SCYL2Q6P3W7 929 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 DCUN1D2Q6PH85 259 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 ZNF574Q6ZN55 896 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 NYAP1Q6ZVC0 841 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 USP53Q70EK8 1073 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 ZNF765Q7L2R6 523 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 TECPR1Q7Z6L1 1165 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 TAF8Q7Z7C8 310 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 PIM3Q86V86 326 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 NPWQ8N729 165 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 FAM71BQ8TC56 605 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 DTD2Q96FN9 168 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 EXOC2Q96KP1 924 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 NUDCD1Q96RS6 583 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 FUCA2Q9BTY2 467 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 SLC12A9Q9BXP2 914 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 GSDMCQ9BYG8 508 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 FOXP3Q9BZS1 431 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 EPB41L5Q9HCM4 733 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 LMBRD1Q9NUN5 540 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 IL17BQ9UHF5 180 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 AMACRQ9UHK6 382 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 PHTF1Q9UMS5 762 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 DOPEY2Q9Y3R5 2298 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 ST14Q9Y5Y6 855 aa11.22□□□□□ -0.61
CLSTN3-206ENST00000535668 ANKRD36A6QL64 1941 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 PRAMEF33A0A0G2JMD5 474 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 STMND1H3BQB6 276 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 MAFKO60675 156 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 PRAMEF10O60809 474 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 LRCH4O75427 683 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 ZIC2O95409 532 aaPredicted RBP11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 CES1P23141 567 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 ARSDP51689 593 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 GPLD1P80108 840 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 ILF3Q12906 894 aaKnown RBP eCLIP11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 ARHGEF7Q14155 803 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 C16orf72Q14CZ0 275 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 TGIF1Q15583 401 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 CNGA3Q16281 694 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 CA9Q16790 459 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 ZSCAN23Q3MJ62 389 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 CFAP58Q5T655 872 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 ADAMTSL4Q6UY14 1074 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 PHLDB2Q86SQ0 1253 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 PELI3Q8N2H9 469 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 TEX26Q8N6G2 289 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 ANKRD20A12PQ8NF67 263 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 TAAR9Q96RI9 348 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 LYSMD1Q96S90 227 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 PEBP4Q96S96 227 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 SNRNP25Q9BV90 132 aaKnown RBP11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 CINPQ9BW66 212 aaPredicted RBP11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 ASPSCR1Q9BZE9 553 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 PHPT1Q9NRX4 125 aaPredicted RBP11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 SPATS2LQ9NUQ6 558 aaKnown RBP11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 CWC15Q9P013 229 aaKnown RBP11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 FOXJ2Q9P0K8 574 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 SIRPGQ9P1W8 387 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 B4GALT6Q9UBX8 382 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 PISDQ9UG56 409 aa11.21□□□□□ -0.61
CLSTN3-206ENST00000535668 IGHV5-10-1A0A0J9YXX1 117 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 CLEC18AA5D8T8 446 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 SLC28A2O43868 658 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 RNF8O76064 485 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 SOD1P00441 154 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 PCCBP05166 539 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 MYBL1P10243 752 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 THRAP10827 490 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 HGFP14210 728 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 MIPP30301 263 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms