RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 H3BRJ5 948 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 HTRA2O43464 458 aaPredicted RBP17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 CPP00450 1065 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 JMJD7P0C870 316 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 GZMAP12544 262 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 CR2P20023 1033 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 ETV5P41161 510 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 PRKCIP41743 596 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 RENBPP51606 427 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 MAZP56270 477 aaKnown RBP17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 MAXP61244 160 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 ZFP36L1Q07352 338 aaKnown RBP17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 TRAF2Q12933 501 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 DPYSL2Q16555 572 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 ANO6Q4KMQ2 910 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 HEATR4Q86WZ0 1026 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 PTCD2Q8WV60 388 aaKnown RBP17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 ZNF599Q96NL3 588 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 ZWILCHQ9H900 591 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 CARS2Q9HA77 564 aaKnown RBP17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 SPATS2LQ9NUQ6 558 aaKnown RBP17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 AIPL1Q9NZN9 384 aa17.1■□□□□ 0.33
RPUSD4-207ENST00000532800 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 CAPN8A6NHC0 703 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 SOCS5O75159 536 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 HEXIM1O94992 359 aaKnown RBP17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 FUCA1P04066 466 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 MYCLP1P12525 358 aaPredicted RBP17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 SKILP12757 684 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 PNLIPP16233 465 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 LHCGRP22888 699 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 VIPR1P32241 457 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 ZNF135P52742 658 aaPredicted RBP17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 KLHL30Q0D2K2 578 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 ARHGEF7Q14155 803 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 TXNRD3NBQ6F5E7 133 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 HSD11B1LQ7Z5J1 315 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 POLNQ7Z5Q5 900 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 NRROSQ86YC3 692 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 SLITRK4Q8IW52 837 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 LZTR1Q8N653 840 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 SPOCK2Q92563 424 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 HSPH1Q92598 858 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 CSPG4P5Q96PW8 444 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 NUDCD1Q96RS6 583 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 MGME1Q9BQP7 344 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 SEMA6CQ9H3T2 930 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 NOD2Q9HC29 1040 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 ACSL6Q9UKU0 697 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 SCINQ9Y6U3 715 aa17.09■□□□□ 0.33
RPUSD4-207ENST00000532800 BOD1L1Q8NFC6 3051 aa17.08■□□□□ 0.33
RPUSD4-207ENST00000532800 PRAMEF33A0A0G2JMD5 474 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 A0A0U1RQS6 177 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 NPIPB15A6NHN6 443 aaPredicted RBP17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 PYCARD-AS1I3L0S3 204 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 J3QKU1 62 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 NUDT21O43809 227 aaKnown RBP17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 MAFKO60675 156 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 PRAMEF10O60809 474 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 CEACAM5P06731 702 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 CCNB1P14635 433 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 AK4P27144 223 aaPredicted RBP17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 PCK1P35558 622 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 ANP32AP39687 249 aaKnown RBP17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 ARL4AP40617 200 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 ETV3P41162 512 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 B4GALNT1Q00973 533 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 MAP9Q49MG5 647 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 PHF19Q5T6S3 580 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 TMCO3Q6UWJ1 677 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 TSPAN33Q86UF1 283 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 GPBAR1Q8TDU6 330 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 DTD2Q96FN9 168 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 MED8Q96G25 268 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 TEX101Q9BY14 249 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 FRMD8Q9BZ67 464 aaPredicted RBP17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 RDH14Q9HBH5 336 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 PHPT1Q9NRX4 125 aaPredicted RBP17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 FOXJ2Q9P0K8 574 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 TMEM63CQ9P1W3 806 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 ST14Q9Y5Y6 855 aa17.08■□□□□ 0.32
RPUSD4-207ENST00000532800 GOLGA6CA6NDK9 693 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 GOLGA6BA6NDN3 693 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 PDE2AO00408 941 aaPredicted RBP17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 NVLO15381 856 aaKnown RBP17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 B4GAT1O43505 415 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 GOLGA6DP0CG33 693 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 RARAP10276 462 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 LIPCP11150 499 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 HSPA9P38646 679 aaKnown RBP17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 GNPDA1P46926 289 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 MAPK10P53779 464 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 OR1D5P58170 312 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 CDK3Q00526 305 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 C16orf72Q14CZ0 275 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 TSR1Q2NL82 804 aaKnown RBP17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 AMZ1Q400G9 498 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 RFLNAQ6ZTI6 216 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 Q6ZVL8 140 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms